OR4B2P Olfactory Receptor
| Gene Symbol | OR4B2P1 (View this gene in GeneCards) |
| Family | 4 |
| Subfamily | B |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | hg449, HsOR11.8.2P, ORL3523 |
| External Ids | HGNC: 8291 GeneBank: AF399445, NG_004136 ORDB: ORL3523 |
| Build #39 labels | OR4B2P |
| Chromosomal location | 11:48,227,429-48,228,331 (+) |
| Cluster | 11@48 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR4B1 | 71.2% | 309 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR4B1 | 72% | 309 |
| Mouse | Or4b1 | 67% | 304 |
| Rat | Or4b1 | 66% | 309 |
| Cow | OR4B1G | 71% | 309 |
| Orang | OR4X2P | 53% | 299 |
| Horse | OR4B1 | 70% | 309 |
| Chimp | OR4B1 | 71% | 309 |
Sequence information
| Nucleotide sequence |
ATGGCCAGTACAAATAATGTGACTGAGTCAATGATCACCAGCCTTTTCCAGGATCCAGCA GTGCAGAGAGTGTGCTTTGTGGTGTTTCTCCCCGTGTACTGGCCATGGAGGTGGGCAATG GCCTCATCGTTCTGACGGTCAGTATCAGCAAGAGTCTGCATTCCCCTGTGTACTTCTTCC TGAGCTACCTGTCATTGATGGAGATCAGTTACTTCACTGTTGTCCCTAAATTCATCACAG ACTTACTTGCCAAGATTAAAGCCATCTCTCTGGAGGGCTATCTGGCTCAGATATTCTTGC ACTTCTTTGGCATCCCCTGGATCTTTCTGCTCCCACTGATGACCAATGACCAATATATGG CCAACTGCAAACTTTATTACTACACAACCATCATGAGCTGCCTGTCTGTCACCTTCTGGT GGCTGGTTTCTGGCTGAGGGGCATAATTCACTCAATGGTTCAGATCCTTGTCTCTGTCCA ATTGTTCTTCTGTGGTCCCAACATGATTGACCACTCATTCTGTGACCTCCAGGTCTTATT CAAGCTTGCCTGCACTGACACCTTTGTGGAGGGGGTTATTGTGTTGGCCAACAGTGAATT AGTATCTGTCTTCTTCCTTATCTTGGTGTCCTCTTAATATCATCATCCTAGTCAACTTGA GGAACCATTCTGCAGAGGGGAGGTGCAAAGCCCTCTCCACCTGTGCCTCTTATCTTGTAT TTTGAACTTGCCATTTTCCTCTACGTGTGACTCTCCTCCACCTTTACTAAAGATAAACTC GTGGCTGTATTTTACGTGGTCATCACCCCCATGCTGAACCCCTTCATCTACACGCTTGGG AATGCAGAGATGAAAATCACCATGAGGAGATTGTTGGGCAGGACAGTGAACTCAGGAATG GAA |
| Conceptual translation |
MASTNNVTESMITSLFQDPAVQRVCFVVFLPVY/AMEVGNGLIVLTVSISKSLHSPVYF FLSYLSLMEISYFTVVPKFITDLLAKIKAISLEGYLAQIFLHFFGIPWIFLLPLMTNDQY MANCKLYYYTTIMSC/VCHLLVAGFWLRGIIHSMVQILVSVQLFFCGPNMIDHSFCDLQ VLFKLACTDTFVEGVIVLANSELVSVFFLILVSS\IIILVNLRNHSAEGRCKALSTCAS YLVFXC\FLYVXSSTFTKDKLVAVFYVVITPMLNPFIYTLGNAEMKITMRRLLGRTV NSGME Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 48,249,779 | 48,249,779 | SNP | A/G | rs10769331 (DbSNP) | |
| 11 | 48,227,893 | 48,227,893 | SNP | T/A | 1000GP (CEU) | |
| 11 | 48,228,227 | 48,228,227 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 48,228,261 | 48,228,261 | SNP | C/T | 1000GP (CEU) | |
| 11 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 48,249,024 | 48,250,324 | CopyNumber | Variation_65937 (DGV) |
| 11 | 48,248,881 | 48,251,883 | Deletion, CopyNumber | #252 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.