OR4F7P Olfactory Receptor
| Gene Symbol | OR4F7P1 (View this gene in GeneCards) |
| Family | 4 |
| Subfamily | F |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | ORL3189 |
| External Ids | HGNC: 15089 ORDB: ORL3189 |
| Build #39 labels | OR4F7P, OR4F10 |
| Chromosomal location | 6:170,639,606-170,640,528 (+) |
| Cluster | 6@171 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR4F1P | 99.35% | 308 |
| OR4F2P | 99.03% | 308 |
| OR4F8P | 99.03% | 308 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR4F1 | 91% | 308 |
| Mouse | Or4f7 | 82% | 308 |
| Rat | Or4f7b | 83% | 308 |
| Rat | Or4f7 | 83% | 308 |
| Rat | Or4f7c | 82% | 308 |
| Cow | OR4F1 | 90% | 308 |
| Cow | OR4F1C | 88% | 306 |
| Cow | OR4F1D | 88% | 308 |
| Orang | OR4F58BP | 73% | 308 |
| Horse | OR4F1 | 91% | 308 |
| Chimp | OR4F21 | 97% | 308 |
| Chimp | OR4F1 | 96% | 308 |
| Chimp | OR4F21BP | 95% | 306 |
Sequence information
| Nucleotide sequence |
ATGGATGGAGAGAATCACTCAGTGGTATCTGAGTTTTTGTTTCTGGGACTCACTCATTCA TGGGAGATCCAGCTCCTCCTCCTAGTGTTTTCCTCTGTGCTCTATGTGGCAAGCATTACT GGAAACATCCTCATTGTGTTTTCTGTGACCACTGACCCTCACTTACACTCCCCCATGTAC TTTCTACTGGCCAGTCTCTCCTTCATTGACTTAGGAGCCTGCTCTGTCACTTCTCCCAAG ATGATTTATGACCTGTTCAGAAAGCGCAAAGTCATCTCCTTTGGAGGCTGCATCGCTCAA ATCTTCTTCATCCACGTCATTGGTGGTGTGGAGATGGTGCTGCTCATAGCCATGGCCTTT GACAGTTATGTGGCCCTATTAAGCCCCTCCACTATCTGACCATTATGAGCCCAAGAATGT GCCTTTCATTTCTGGCTGTTGCCTGGACCCTTGGTGTCAGTCACTCCCTGTTCCAACTGG CATTTCTTGTTAATTTACCCTTCTGTGGCCCTAATGTGTTGGACAGCTTCTACTGTGACC TTCCTCAGCTTCTCAGACTAGCCTGTACCGACACCTACAGATTGCAGTTCATGGTCACTG TTAACAGTGGGTTTATCTGTGTGGGTACTTTCTTCATACTTCTAATCTCCTACATCTTCA TCCTGTTTACTGTTTGGAAACATTCCTCAGGTGGTTCATCCAAGGCCCTTTCCACTCTTT CAGCTCACAGCACAGCGGTCCTTTTGTTCTTTGGTCCACCCATGTTTGTGTATACATGGC CACACCCTAATTCACAGATGGACAAGTTTCTGGCTATTTTTGATGCAGTTCTCACTCCTT TTCTGAATCCAGTTGTCTATACATTCAGGAATAAGGAGATGAAGGCAGCAATAAAGAGAG TATGCAAACAGCTAGTGATTTAC |
| Conceptual translation |
MDGENHSVVSEFLFLGLTHSWEIQLLLLVFSSVLYVASITGNILIVFSVTTDPHLHSPMY FLLASLSFIDLGACSVTSPKMIYDLFRKRKVISFGGCIAQIFFIHVIGGVEMVLLIAMAF DSYVAL/KPLHYLTIMSPRMCLSFLAVAWTLGVSHSLFQLAFLVNLPFCGPNVLDSFYC DLPQLLRLACTDTYRLQFMVTVNSGFICVGTFFILLISYIFILFTVWKHSSGGSSKALST LSAHSTAVLLFFGPPMFVYTWPHPNSQMDKFLAIFDAVLTPFLNPVVYTFRNKEMKAAIK RVCKQLVIY Protein domains and features |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 6 | 170,821,217 | 171,009,919 | CopyNumber | Variation_3658 (DGV) |
| 6 | 170,939,053 | 171,025,493 | CopyNumber | Variation_7549 (DGV) |
| 6 | 170,937,231 | 171,043,914 | CopyNumber | Variation_32856 (DGV) |
| 6 | 170,934,886 | 171,055,036 | CopyNumber | Variation_69721 (DGV) |
| 6 | 170,931,498 | 170,990,405 | CopyNumber | Variation_69722 (DGV) |
| 6 | 170,911,102 | 171,043,083 | CopyNumber | Variation_94306 (DGV) |
| 6 | 170,938,048 | 170,951,512 | CopyNumber | Variation_94307 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.