OR4G11P Olfactory Receptor
| Gene Symbol | OR4G11P1 (View this gene in GeneCards) |
| Family | 4 |
| Subfamily | G |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR1.1.2P |
| External Ids | HGNC: 31276 GeneBank: AB065944, NG_004423 |
| Build #39 labels | |
| Chromosomal location | 1:63,015-63,884 (+) |
| Cluster | 1@0a |
| Synteny | CLIC#0 |
| Remarks | Coding for partial protein |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR4G1P | 97.93% | 290 |
| OR4G2P | 98.28% | 290 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR4G11 | 83% | 288 |
| Mouse | Or4g7 | 80% | 287 |
| Rat | Or4g7 | 80% | 289 |
| Cow | OR4G2 | 83% | 290 |
| Orang | OR4G2P | 91% | 278 |
| Horse | OR4G2 | 84% | 290 |
| Chimp | OR4G2 | 98% | 290 |
Sequence information
| Nucleotide sequence |
ATGCAGTTTTTCCTTTTTCTCTTCTTCTCTTTATTCTATGTGGGAATTATCCTGGGAAAA CTCTTCATTGTGTTCACAGTGATCTTTGATCCTCACTTACACTCCCCCATGTATATTCTG CTGGCCAACCTATCGCTCATTGACTTGAGCCTTTCATCTACCACAGTTCCTAGGTTGATC TACGATCTTTTTACTGATTGTAAAGTTATTTCCTTCCATAATTGCATGATACAAAAGTTC TTTATCCATGTTATGGGAGGAGTTGAAATGGTGCTGCTGATAGTCATGGCATATGATAGG TACACTGCGATCTGCAAGCCTCTCCACTATCCAACTATTATGAATCCCAAAATGTGCATG TTTTTGGTAGCAGCAGCTTGGGTCATTGGGGTGATTCATGCTATGTCTCAGTTTGTTTTT GTCATAAATTTACCCTTCTGTGGCCCTAATAATGTGGGGAGCTTTTATTGTGATTTTCCT CGGGTTATTAAACTTGCATGCATGGACACTTATGGGCTAGAATTTGTGGTCACTGCCAAC AGTGGATTCATATCGATGGGCACCTTCTTTTTCTTAATTGTATCATACATTTTTATTCTG GTCACTGTCCAACGACATTCCTCAAATGATTTATCCAAAGCATTCTTCACTTCGTCGGCT CACATCACCGTAGTGGTTTTGTTTTTTGCTCCATGCATGTTTCTCTACGTGTGGCCTTTC CCTACTAAGTCATTGGATAAATTTTTTGCCATCATGAACTTTGTTGTCACCCCTGTCGTA AATCCTGCCATCTATACTTTAAGGAACAAAGATATGAAGTTTGCAATGAGAAGGCTGAAT CAACATATTTTAAATTCTATGGAGACGACA |
| Conceptual translation |
MQFFLFLFFSLFYVGIILGKLFIVFTVIFDPHLHSPMYILLANLSLIDLSLSSTTVPRLI YDLFTDCKVISFHNCMIQKFFIHVMGGVEMVLLIVMAYDRYTAICKPLHYPTIMNPKMCM FLVAAAWVIGVIHAMSQFVFVINLPFCGPNNVGSFYCDFPRVIKLACMDTYGLEFVVTAN SGFISMGTFFFLIVSYIFILVTVQRHSSNDLSKAFFTSSAHITVVVLFFAPCMFLYVWPF PTKSLDKFFAIMNFVVTPVVNPAIYTLRNKDMKFAMRRLNQHILNSMETT Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 1 | 100 | -100 | SNP | G/A | 1000GP (YRI) | |
| 1 | 63,671 | 63,671 | SNP | G/A | 1000GP (CEU, CHBJPT) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 230 (Hasin) | |||
| 1 | 10,377 | 998,287 | CopyNumber | Variation_3274 (DGV) |
| 1 | 10,499 | 91,591 | CopyNumber | Variation_68172 (DGV) |
| 1 | 10,499 | 177,368 | CopyNumber | Variation_68173 (DGV) |
| 1 | 11,516 | 84,611 | CopyNumber | Variation_83988 (DGV) |
| 1 | 11,516 | 89,484 | CopyNumber | Variation_74276 (DGV) |
| 1 | 11,516 | 250,293 | CopyNumber | Variation_74274 (DGV), Variation_83989 (DGV) |
| 1 | 11,931 | 125,961 | CopyNumber | Variation_30360 (DGV) |
| 1 | 27,982 | 177,346 | CopyNumber | Variation_0675 (DGV), Variation_2041 (DGV) |
| 1 | 35,881 | 84,611 | CopyNumber | Variation_83987 (DGV) |
| 1 | 35,881 | 89,484 | CopyNumber | Variation_74275 (DGV) |
| 1 | 40,761 | 69,992 | CopyNumber | Variation_83990 (DGV) |
| 1 | 55,394 | 86,303 | CopyNumber | Variation_0991 (DGV) |
| 1 | 60,246 | 84,611 | CopyNumber | Variation_83991 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.