Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR4G4P Olfactory Receptor

Gene Symbol OR4G4P1 (View this gene in GeneCards)
Family 4
Subfamily G
Pseudogene Yes
CORP pseudogene probability score
Aliases HsOR1.1.1P, ORL3188
External Ids HGNC: 14822   GeneBank: NG_004148   ORDB: ORL3188   
Build #39 labels OR4G4P
Chromosomal location 1:52,452-53,395 (+)
Cluster 1@0a
Synteny CLIC#0
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR4G3P 99.68% 314
OR4G6P 99.04% 314

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR4G9 70% 309
Mouse Or4g7 57% 312
Rat Or4g7 57% 314
Cow OR4G9 70% 314
Orang OR4G3P 90% 305
Orang OR4G3BP 90% 294
Horse OR4G25 68% 314
Chimp OR4G3P 97% 259

Expression evidences

Source Accession
ESTs BG206860

Sequence information

Nucleotide sequence ATGGATAGAGTAAATAATTCTGCGGTATCTAAATTTGTATTGATTGGACTTTCAAGCTCT
TGGGAGATGCATCTTTTTCTTTTTTGGTTCTTCTCTGTGTTCTACATGGGAATTATCCTG
GAAAATCTCTTCATTGTGTTCACAGTAATTATTGACTCTCATTTAAATTCCCCAGGTACT
GCCTACTGGCCAACATTTATCTTCTTGATCTGGGTCTTCTCCTACAGTTCTGACTTTTTC
ACTAACTGCAGCATCATTTCTTTTCCAAGATGCATCATACAGATATTTTTCATTTGTGTC
ATGCGTAAAAATTGAGATGGTGCTGCTCATAACCATGGCATAGAGCAGGTACACTGCCAA
TCTGTAAGCCTCCCCATTACCTGACCACAATGAACCCCAAAATGTGTGTTTCCTTTGTTG
GAGGCATCCTGGATAGTCAGGATAATCCATGCTGTATCTCAGTTTGTTTTTGCCATAAAC
TTGCCTTTTTGTGGCCCTAATAGAGTAGGTAGTTTTCACTGTGATTTTCCTTATGTCATG
AAACTTGCTTGTGTAGACACTTACAAACTAGAGGTTGTAGTCACTGCTAACAGTGGGCTT
ATATCCATAGCTACCTGTTTCTTATTAATAATATCCTATATTTTCATTTCGGTAACCGTC
TAGAATCCTTCTTCAGGAGACTTATCTAAAGCATTTGTGTCATGTTAGATCACATCACAG
TAGGGATTTTGTTTTTTATGCCATGTATATTTCTGTATGTGTAGCCTTTGCCTAAAACAA
CACATGATTAATATTTGTTCATTGTTCCTTTTGCTATCACCCCTGTCTAGGATCTACACA
TTAAGAAACAAAGACATGAACGTCTCCATGGAAAGACTGGGAAAATGGATTGCAGGTTCT
AGCAGGATGTCATAATAAATGGTGCATATCCAGAGTGCAAGATG
Conceptual translation MDRVNNSAVSKFVLIGLSSSWEMHLFLFWFFSVFYMGIILENLFIVFTVIIDSHLNSP/
YCLLANIYLLDL\FSYSSDFFTNCSIISFPRCIIQIFFICVMRK\EMVLLITMAXRY
TA\CKPPHYLTTMNPKMCVS\LEASWIVRIIHAVSQFVFAINLPFCGPNRVGSFHCDF
PYVMKLACVDTYKLEVVVTANSGLISIATCFLLIISYIFISVTVXPSSGDLSKAFVSC/br/>SDHITVGILFFMPCIFLYVXLPKTTHDXLFIVP\LSPLSRIYTLRNKDMNVSMERLG
KWIAGSSRMSXMVH/PECKM

Protein domains and features

Variations - CNVs

Chr Start End Type Sources
CopyNumber 214 (Hasin)
1 10,377 998,287 CopyNumber Variation_3274 (DGV)
1 10,499 91,591 CopyNumber Variation_68172 (DGV)
1 10,499 177,368 CopyNumber Variation_68173 (DGV)
1 11,516 55,373 CopyNumber Variation_74277 (DGV)
1 11,516 84,611 CopyNumber Variation_83988 (DGV)
1 11,516 89,484 CopyNumber Variation_74276 (DGV)
1 11,516 250,293 CopyNumber Variation_74274 (DGV), Variation_83989 (DGV)
1 11,931 125,961 CopyNumber Variation_30360 (DGV)
1 27,982 177,346 CopyNumber Variation_0675 (DGV), Variation_2041 (DGV)
1 35,881 84,611 CopyNumber Variation_83987 (DGV)
1 35,881 89,484 CopyNumber Variation_74275 (DGV)
1 40,761 69,992 CopyNumber Variation_83990 (DGV)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.

AceView Gene Models

The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.

Accession Type Chr Start End Strand
OR4G4P.aApr07-unspliced main_exon CDS_partial chr1 53,277 53,395 +
3UTR chr1 53,395 54,288 +