OR4K7P Olfactory Receptor
| Gene Symbol | OR4K7P1 (View this gene in GeneCards) |
| Family | 4 |
| Subfamily | K |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR18-2, HsOR18.1.1P, ORL3751 |
| External Ids | HGNC: 14756 GeneBank: BK004744 ORDB: ORL3751 |
| Build #39 labels | OR4K10P, OR4K7P |
| Chromosomal location | 18:14,570,844-14,571,776 (+) |
| Cluster | 18@15 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR4K12P | 97.75% | 311 |
| OR4K6P | 94.23% | 312 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR4K6 | 86% | 312 |
| Mouse | Or4k6 | 84% | 312 |
| Rat | Or4k6 | 84% | 312 |
| Cow | OR4K6 | 86% | 312 |
| Orang | OR4K6P | 91% | 310 |
| Horse | OR4K6 | 87% | 312 |
| Chimp | OR4K7BP | 98% | 309 |
| Chimp | OR4K7DP | 97% | 311 |
| Chimp | OR4K7CP | 97% | 310 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | EG328634 |
Sequence information
| Nucleotide sequence |
ATGGAGGGGTTCAACTATTCCAGAGTATCTGAATTCATGTTACTTGGACTTACTGATTCT CCTGAACTCCAGATATTCTTTTTTGTGGTGTTTTCTGTCTTCTATTTAATGACCATGTTA GGCAGCTGCCTGATTTTGCTCACTGTCCTATCCACCTCACACCTTCACTCTCGCATGTAC TTCCTGCTCAGCAACCTGTCTCATTGACATGTGCCTGTCCTCCTTTGCCACACCAAAGAT GATTATGGACTTTTTTGCTCTGCGTAAGACCATCTCTTTTGAAGGCTGCATTTCTCAGAT CTTTTTTTTACACCTCTTCAATGGGACTGAGATTGTGCTGCTGATCTCCATGTCTTTTGA CAGGTATATTGCCATATGTAAACCTCTCCACTATTCAACAATTATGAGCCAAAGAGTGTG TGTTGAGCTTGTGGCAGTTTCTTGTTGGACAGTGGGCTTTCTACATACAATGAGCCAATT AGTTTTTCCCTCTATTTGCCCTTCTGTGTTCCCAATGTTGTAGACAGTTTTTTCTGTGAT CTTCCTTTGGTCATCCAGTTAGCTTGTATAGATATTTATGTTCTTGGGACCTCCATGATT TCAACCAGTGGTGTGATTGCTCTTATAAGTTTTCTGCTTTTGCTCACCTCCTACATCATT GTTCTTAATATTGTCAGGGACTACTCCTCCACAGGATCCTCCAAGGCTCTTTCTACCTGT ACAGCGCATTTTATTGTTGTGTTAATGTTCTTTGGGCCCTGTATTTTCATTTATGTGTGG CCTTCCACAAACTTCCTGGTAGACAAAATTCTCTCCGTTTTCTATACCATCTTCACTCCC TTTCTGAATCCACTTATCTATACTTTGAGAAACCAGGAAGTGAAGACAGCAATGAAGAAG AAACTGAATATTCAGTATTTCAGTCTTGGGAAA |
| Conceptual translation |
MEGFNYSRVSEFMLLGLTDSPELQIFFFVVFSVFYLMTMLGSCLILLTVLSTSHLHSRMY FLLSNLS\DMCLSSFATPKMIMDFFALRKTISFEGCISQIFFLHLFNGTEIVLLISMSF DRYIAICKPLHYSTIMSQRVCVELVAVSCWTVGFLHTMSQLVFP/YLPFCVPNVVDSFF CDLPLVIQLACIDIYVLGTSMISTSGVIALISFLLLLTSYIIVLNIVRDYSSTGSSKALS TCTAHFIVVLMFFGPCIFIYVWPSTNFLVDKILSVFYTIFTPFLNPLIYTLRNQEVKTAM KKKLNIQYFSLGK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 18 | 14,570,925 | 14,570,925 | SNP | C/T | rs28582232 (DbSNP) | |
| 18 | 14,570,962 | 14,570,962 | SNP | A/G | rs7242086 (DbSNP) | |
| 18 | 14,571,018 | 14,571,018 | SNP | C/T | rs2646606 (DbSNP) | |
| 18 | 14,571,038 | 14,571,038 | SNP | A/C | rs2646607 (DbSNP) | |
| 18 | 14,571,513 | 14,571,513 | SNP | C/T | rs2646610 (DbSNP) | |
| 18 | 14,571,568 | 14,571,568 | SNP | A/G | rs2646611 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 233 (Hasin) | |||
| 18 | 13,998,748 | 15,377,893 | CopyNumber | Variation_4053 (DGV) |
| 18 | 14,431,322 | 14,599,321 | CopyNumber | Variation_73119 (DGV) |
| 18 | 14,432,183 | 14,609,021 | CopyNumber | Variation_5046 (DGV) |
| 18 | 14,442,131 | 14,582,112 | CopyNumber | Variation_32203 (DGV) |
| 18 | 14,557,186 | 14,599,685 | CopyNumber | Variation_30865 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.