OR4W1P Olfactory Receptor
| Gene Symbol | OR4W1P1 (View this gene in GeneCards) |
| Family | 4 |
| Subfamily | W |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | ORL4118 |
| External Ids | HGNC: 15405 GeneBank: NG_004159 ORDB: ORL4118 |
| Build #39 labels | OR4W1P |
| Chromosomal location | X:126,502,871-126,503,218 (-) |
| Cluster | X@126 |
| Synteny | CLIC#0 |
| Remarks | Disrupted by Line repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR4G11P | 40.17% | 117 |
| OR4G1P | 40.17% | 117 |
| OR4G2P | 40.17% | 117 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR4G8 | 48% | 125 |
| Mouse | Or4g16 | 42% | 124 |
| Rat | Or4g17 | 45% | 121 |
| Cow | OR4G8 | 50% | 125 |
| Orang | OR4G8 | 46% | 128 |
| Horse | OR4G27 | 49% | 128 |
| Chimp | OR4G8 | 46% | 128 |
Sequence information
| Nucleotide sequence |
ATACTTGCCTGCATAGTTGGATAGAAGTTTGCATTTATTATTTCTCCAAACCATCACTTC ATGATAATGGTCACATTCATTTTAGTTAACATTTAAAAACATTCTTCAGGAAACTTATCC AGTGCTCTTATCATTTTGTTCATTTTCATCCCTGTTGTTTCTCTATTTTTCACTCCATGC GTAGTTCTCTATGTTTGGCCTACTTTGCCACCATCACTTGATAAAAATATGTTCATTGTT GACTTTGTTGTCAACCCTGTCTTGAAGCCTGCCACCTACATATTACAGAACAAAGACATA AAGGTAGCACTTTGAAATTTGCATGAAAAGAGAACTTATTCCAGCTTT |
| Conceptual translation |
LACIVGXFAFIISPNHHFMIMVTFILV\FKNILQETYPVLLSFCS/FIPVVSLFFTP CVVLYVWPTLPPSLDKNMFIVDFVVNPVLKPATYILQNKDIKVALXLHEKRTYSSF Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| X | 125,636,978 | 125,636,978 | SNP | G/T | rs58392478 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 140 (Hasin) | |||
| X | 125,582,490 | 125,732,866 | CopyNumber | Variation_0253 (DGV) |
| X | 125,614,880 | 125,673,809 | CopyNumber | Variation_4170 (DGV) |
| X | 125,634,854 | 125,637,301 | Deletion | #314 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.