OR51A10P Olfactory Receptor
| Gene Symbol | OR51A10P1 (View this gene in GeneCards) |
| Family | 51 |
| Subfamily | A |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-42, HsOR11.3.67P, ORL3567 |
| External Ids | HGNC: 15185 GeneBank: BK004683, NG_004229 ORDB: ORL3567 |
| Build #39 labels | OR51A10P, OR51A11P, OR51A13 |
| Chromosomal location | 11:5,468,504-5,469,359 (-) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR51G2 | 52.8% | 286 |
| OR51I1 | 56.94% | 281 |
| OR51I2 | 59.93% | 282 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR51A10 | 86% | 288 |
| Mouse | Or51a10 | 85% | 289 |
| Rat | Or51a10 | 86% | 289 |
| Cow | OR51A10 | 85% | 289 |
| Orang | OR51A42P | 71% | 285 |
| Horse | OR51A10 | 83% | 288 |
| Chimp | OR51A10 | 97% | 258 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BF132682 |
| mRNA | BC022184 |
Sequence information
| Nucleotide sequence |
ATGAAGGGTCTGGAGCACTGGCTGGCTGCCCTTCTGCTGCTGCTTTGTGCTATTTCCTTC CTGGGCAACATCCTCATCCTCTTTATCATAAAGGAAGAGCAGAGCTTGCACCAGCCAATG TACTACTTCCTGTCTCTTTTTTCTGTTAATGACCTGGGTGTGTCCTTTTCTACATTGCCC ACTGTACTGGCTGCTGTGTGTTTTCATGCCCCAGAGACAACTTTTGATGCCTGCCTGGCC CAGACGTTCTTCATCCACTTTTCCTCCTGGACAGAGTTTGGCATCCTACTGGCCATGAGT TTTGACCACTATGTGGCCATCTGTAACCCGCTGCGCTATGCCACAGTGCTCACTGATGTC CGTGTGGCCCACAATGGCATATCCATTGTCATCCGCAGCTTCTGCATGGTATTCCCACTT CCCTTCCTCCTGAAGAGACTGCCTTTCTGTAAGGCCAGTGTGGTACTGGCCCATTCCTAC TGTCTGCATGCAGACCTGATTCGGCTGCCCTGTGGAGACACTACCATCAACAGCATGTAT GGCCTGTTCATTGTCATCTCTGCCTTTGGTGTAGATTCACTGCTCATCCTCCTCTCCTAT GTGCTCATTCTACATTCTGTGCTGGCCATTGCCTCCAGGGGTGAGAGGCTTAAGACACTC AACACATGTGTGTCACATATCTATGCAGTGCTGATCTTCTATGTGCCTATGGTTAGTGTG TCCATGGTTCATCGATTTGGGAGGCATGCTCCTGAATATGTGCACAAGTTCATGTCTCTT TGTACCTCCAATGCTCTACCCAATTATCTATTCCATCAAGACTAAGGAGATTCGCAGGAG ACTACACAAGATGTTA |
| Conceptual translation |
MKGLEHWLAALLLLLCAISFLGNILILFIIKEEQSLHQPMYYFLSLFSVNDLGVSFSTLP TVLAAVCFHAPETTFDACLAQTFFIHFSSWTEFGILLAMSFDHYVAICNPLRYATVLTDV RVAHNGISIVIRSFCMVFPLPFLLKRLPFCKASVVLAHSYCLHADLIRLPCGDTTINSMY GLFIVISAFGVDSLLILLSYVLILHSVLAIASRGERLKTLNTCVSHIYAVLIFYVPMVSV SMVHRFGRHAPEYVHKFM/S/VPPMLYPIIYSIKTKEIRRRLHKML Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | T/C | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
| 11 | 5,468,847 | 5,468,847 | SNP | A/C | 1000GP (CEU, CHBJPT) | |
| 11 | 5,468,925 | 5,468,925 | SNP | C/G | 1000GP (CEU, CHBJPT) | |
| 11 | 5,468,952 | 5,468,952 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 11 | 5,469,115 | 5,469,115 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 5,469,241 | 5,469,241 | SNP | A/G | 1000GP (CEU) | |
| 11 | 5,469,249 | 5,469,249 | SNP | G/A | 1000GP (CHBJPT) | |
| 11 | 5,469,299 | 5,469,299 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 5,469,313 | 5,469,313 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 11 | 5,489,927 | 5,489,927 | SNP | G/A | rs61748001 (DbSNP) | |
| 11 | 5,489,965 | 5,489,965 | Del(1) | -/C | rs35984509 (DbSNP) | |
| 11 | 5,490,077 | 5,490,077 | SNP | C/A | rs2736569 (DbSNP) | |
| 11 | 5,490,118 | 5,490,118 | Del(1) | -/G | rs35709721 (DbSNP) | |
| 11 | 5,490,155 | 5,490,155 | SNP | C/G | rs7925620 (DbSNP) | |
| 11 | 5,490,159 | 5,490,159 | SNP | A/G | rs7940178 (DbSNP) | |
| 11 | 5,490,182 | 5,490,182 | SNP | C/T | rs17297010 (DbSNP) | |
| 11 | 5,490,345 | 5,490,345 | SNP | G/A | rs449937 (DbSNP) | |
| 11 | 5,490,372 | 5,490,372 | SNP | T/G | rs61738627 (DbSNP) | |
| 11 | 5,490,408 | 5,490,408 | SNP | A/G | rs55679555 (DbSNP) | |
| 11 | 5,490,454 | 5,490,453 | Ins(1) | -/A | rs58849486 (DbSNP) | |
| 11 | 5,490,471 | 5,490,471 | SNP | G/A | rs61743063 (DbSNP) | |
| 11 | 5,490,472 | 5,490,472 | SNP | T/C | rs61741554 (DbSNP) | |
| 11 | 5,490,529 | 5,490,529 | SNP | A/G | rs10768978 (DbSNP) | |
| 11 | 5,490,543 | 5,490,543 | SNP | T/C | rs366257 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 5,416,622 | 5,492,033 | CopyNumber | Variation_2901 (DGV) |
| 11 | 5,431,984 | 5,493,309 | CopyNumber | Variation_9174 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.