OR51A3P Olfactory Receptor
| Gene Symbol | OR51A3P1 (View this gene in GeneCards) |
| Family | 51 |
| Subfamily | A |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-30, HsOR11.3.36P, ORL3497 |
| External Ids | HGNC: 14794 GeneBank: BK004774, NG_002268 ORDB: ORL3497 |
| Build #39 labels | OR51A3P |
| Chromosomal location | 11:4,937,356-4,938,294 (-) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR51A2 | 57.61% | 309 |
| OR51A4 | 59.16% | 311 |
| OR51A7 | 60.39% | 308 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR51A8 | 60% | 311 |
| Mouse | Or51a6 | 61% | 308 |
| Rat | Or51a45-ps | 64% | 294 |
| Cow | OR51A3 | 80% | 313 |
| Orang | OR51A3 | 93% | 313 |
| Horse | OR51A3 | 82% | 300 |
| Chimp | OR51A5 | 59% | 313 |
Sequence information
| Nucleotide sequence |
ATGTCTCCTCTTAATGACACAAAAATGGAAGTCCTTAGATTCCTCCTTATCGGGATCACT GGACTGGAGAAAAGTCGCACCTGGATATCCATTCCTTTCTTATCTGTGTACCTTCTTTCT TGGATGGGTAATTTTACCGTCCTCTTTTTTATCAAGACAGAGCAAAGCCTCCATGAACCT ATGTATTATTTGCTTTCCATGCTCTCCATCTCTGACCTAGGGCTGTCTCTGTCTTCCTTA CCCATCACTTTGGGACTATTCCTATTTGATGTCCATGAAATTCATGCAGCTCCATGCTTT GCCTAGGAATTTTTTATCCATCTGTTTACAGTCAGTGAAGCCTCTGTACTGTCTGTAATG GCATTTGACTGGTATGTGGCAATCCACAGTCCTTTGAGATACAGCACTATCTTAACTAGT CCCAGAGCCATCAAAACAGGGGTTCTTCTGACTTCCAAGAATGTTCTTTTGATCCTTCCA CTGCCCTTTCTCTTGCAAAGGCTGAGATATTGTCATCAAAACCTGCTCTCCCACTCCTAT TGTCTCCACCAGGATGTCATGAAGCTGATGTGTTCTGACAACACAGTCAATGTTGTCTAC GGACTCTGTGCAGGACTTTCTACTATGCTGGACTTGGTGTTTATTACCTTCTCCTAAATT ATGATTTTAAGGGCTGTACTGGGAATTGCTACCCCCAGACAGCAGTTCAAGGCCCTCAAC ACGTGCATCTCTCACATCTGTGCTGTGCTTATCTTCTATGTGCCCACGCTGAGTGCTGCC ATGCTCCACCAGTTTGCCAGGGATGTGTCTCCTATGATCCACGTCCTCATGGCTGATATT TTTCTGCTGGTGCCACCCCTGTTGAATCCCATCGTGTACTGTGTGAAGACCCACCAAATC CGAGAAAAGGTTGTGGGGAAACTTTGTCCAAAAGTAAGT |
| Conceptual translation |
MSPLNDTKMEVLRFLLIGITGLEKSRTWISIPFLSVYLLSWMGNFTVLFFIKTEQSLHEP MYYLLSMLSISDLGLSLSSLPITLGLFLFDVHEIHAAPCFAXFFIHLFTVSEASVLSVM AFDWYVAIHSPLRYSTILTSPRAIKTGVLLTSKNVLLILPLPFLLQRLRYCHQNLLSHSY CLHQDVMKLMCSDNTVNVVYGLCAGLSTMLDLVFITFSXMILRAVLGIATPRQQFKALN TCISHICAVLIFYVPTLSAAMLHQFARDVSPMIHVLMADIFLLVPPLLNPIVYCVKTHQI REKVVGKLCPKVS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
| 11 | 4,937,417 | 4,937,417 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 11 | 4,937,472 | 4,937,472 | SNP | C/T | 1000GP (CEU) | |
| 11 | 4,937,528 | 4,937,528 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 4,937,731 | 4,937,731 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 11 | 4,937,850 | 4,937,850 | SNP | G/A | 1000GP (CEU) | |
| 11 | 4,937,925 | 4,937,925 | SNP | A/G | 1000GP (CEU) | |
| 11 | 4,938,050 | 4,938,050 | SNP | A/G | 1000GP (CEU) | |
| 11 | 4,938,249 | 4,938,249 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 4,958,647 | 4,958,647 | SNP | C/T | rs11034732 (DbSNP) | |
| 11 | 4,958,702 | 4,958,702 | SNP | C/T | rs16907558 (DbSNP) | |
| 11 | 4,958,758 | 4,958,758 | SNP | G/A | rs2596005 (DbSNP) | |
| 11 | 4,958,833 | 4,958,833 | Del(1) | -/G | rs34522077 (DbSNP) | |
| 11 | 4,958,961 | 4,958,961 | SNP | C/T | rs17339000 (DbSNP) | |
| 11 | 4,959,265 | 4,959,264 | Ins(1) | -/G | rs34311978 (DbSNP) | |
| 11 | 4,959,479 | 4,959,479 | SNP | A/G | rs72858189 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 92 (Hasin) | |||
| 11 | 4,907,893 | 5,135,331 | CopyNumber | Variation_3835 (DGV) |
| 11 | 4,946,334 | 4,979,373 | CopyNumber | Variation_34970 (DGV) |
| 11 | 4,950,959 | 4,997,769 | CopyNumber | Variation_34971 (DGV) |
| 11 | 4,952,232 | 4,977,682 | CopyNumber | Variation_34973 (DGV) |
| 11 | 4,959,236 | 4,985,373 | CopyNumber | Variation_0413 (DGV), Variation_34974 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.