OR51A5P Olfactory Receptor
| Gene Symbol | OR51A5P1 (View this gene in GeneCards) |
| Family | 51 |
| Subfamily | A |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.3.39P, ORL3502 |
| External Ids | HGNC: 14801 GeneBank: NG_002263 ORDB: ORL3502 |
| Build #39 labels | OR51A5P |
| Chromosomal location | 11:4,972,946-4,973,884 (-) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR51A2 | 71.61% | 310 |
| OR51A4 | 72.12% | 312 |
| OR51A7 | 72.73% | 308 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR51A8 | 76% | 312 |
| Mouse | Or51a5 | 83% | 313 |
| Rat | Or51a5b-ps | 75% | 313 |
| Cow | OR51A5 | 86% | 313 |
| Cow | OR51A5C | 86% | 313 |
| Orang | OR51A8 | 75% | 311 |
| Horse | OR51A5 | 89% | 313 |
| Chimp | OR51A5 | 98% | 313 |
Sequence information
| Nucleotide sequence |
ATGTCCATTCTCAATACCTCTGAAATGGAAATCTCTATTTTCTACTTGGTTGGGATCCCA GGTTTGGAGCATGCCAATATTTGGATCTCTATCCCCATATGTCTCATGTACACTGTTGCT ATCCTAGGGAATTGTACCATTCTGTTTTTCATAAAAACAGAGCCTTCTTTGCATGAGCCC ATGTACTATTTTCTCTCCATGTTGGCTCTCTCTGACCTGGGACTATCCCTCTCCTCTCTC CCTACCATGTTAAGGATTTTCCTGTTCAATGCTCCAGGAATTTCCCCTGATGCCTGTATT GCTCAAGAGTTTTTCATCCATGGATTCTCAGCTATGGAGTCATCTGTACTTCTTATAATG TCCTTTGATCGCTTTATTGCCATCTGCAACCCCCTGAGATACACTTCCATCCTCACCAGT GCCAGAGTCATTCAAATTGGGCTTGCTTTTTCTCTCAAAAATGTTTTGTTGATCCTCCCA TTTCCTTTCACTCTAAAACATCTAAAATATTGTAAGAAGAACCTCCTGTCCCAATCCTAC TGCCTCCATCAAGATGTCATGAAACTGGCCTGCACTGACAACAAGGTCAACATCATCTAT GGCTTATTTGTGGCTCTCACAGGCATCCTAGACTTGACATTTATTTTCATGTCCTACATG TTGATACTGAAAGCAGTGTTGAGCATAGCATCATGAAAGAAAAGGCTCAAGGTCCTCAAT ACATGTGTTTCCCACATCTGTGCTGTGCTCATCTTCTATGTGCCCATTATCTCCCTAGCT GTCATCTACCGGTTTGCCAAACACAGTTTCCCAATCACTAGGATCCTCATAGCTGATGCT TTTCTGCTGGTGCCTCCATTGATGAACCCCATTGTATACTGTGTGAAGAGCCAGCAGATA AGAAATCTTGTCTTAGAAAAACTGTGCCAGAAGCAAAGC |
| Conceptual translation |
MSILNTSEMEISIFYLVGIPGLEHANIWISIPICLMYTVAILGNCTILFFIKTEPSLHEP MYYFLSMLALSDLGLSLSSLPTMLRIFLFNAPGISPDACIAQEFFIHGFSAMESSVLLIM SFDRFIAICNPLRYTSILTSARVIQIGLAFSLKNVLLILPFPFTLKHLKYCKKNLLSQSY CLHQDVMKLACTDNKVNIIYGLFVALTGILDLTFIFMSYMLILKAVLSIASXKRLKVLN TCVSHICAVLIFYVPIISLAVIYRFAKHSFPITRILIADAFLLVPPLMNPIVYCVKSQQI RNLVLEKLCQKQS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | T/C | 1000GP (YRI, YRI) | |
| 11 | 4,973,289 | 4,973,289 | SNP | A/G | 1000GP (CHBJPT) | |
| 11 | 4,973,683 | 4,973,683 | SNP | A/G | 1000GP (CHBJPT) | |
| 11 | 4,994,677 | 4,994,676 | Ins(1) | -/C | rs35367467 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 4,907,893 | 5,135,331 | CopyNumber | Variation_3835 (DGV) |
| 11 | 4,950,959 | 4,997,769 | CopyNumber | Variation_34971 (DGV) |
| 11 | 4,994,293 | 4,998,017 | CopyNumber | Variation_85628 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.