OR51A6P Olfactory Receptor
| Gene Symbol | OR51A6P1 (View this gene in GeneCards) |
| Family | 51 |
| Subfamily | A |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-17, HsOR11.3.32P, ORL3535 |
| External Ids | HGNC: 15187 GeneBank: AY284485-AY284516, BK004772, NG_004325 ORDB: ORL3535 |
| Build #39 labels | OR51A6P |
| Chromosomal location | 11:4,889,578-4,890,596 (-) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR51A5P | 64.5% | 338 |
| OR51A7 | 68.86% | 334 |
| OR51A8P | 66.18% | 340 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR51A6 | 80% | 337 |
| Mouse | Or51a6 | 81% | 337 |
| Rat | Or51a6-ps | 74% | 332 |
| Cow | OR51A6B | 72% | 334 |
| Orang | OR51A8 | 69% | 339 |
| Horse | OR51A6 | 79% | 323 |
| Chimp | OR51A8 | 70% | 339 |
Sequence information
| Nucleotide sequence |
ATGCACCTTCCCAATTCTTCTGAAATTGCGATTACCACCTTCTTTCTGATTGGAATACCA GGGCTGGAGCATGCCCATATATGGATATCTGTCCCCATCTGCCTCATGTACTTGGTAGCC ATCCTAGGCAATTGCACAATCCTCTTTGTTATCAGGACTGAGCCCTCACTCCATGCACCC ATGTACTATTTCCTTTCCATGTTGGCTGTCTCTGATCTGGGCCTGTCCCTCTCCTACCTA CCCACTATGCTGAGGATCTTTGTATTCAATGCCACAGGAATCTCCTCAAATGCTCGCTTT GCTCAAGAATTCTTTATTCATGGATTCACAGATATGGAGTCCTCAGTGCTTCTCGTCATG TCTTTTGACCGGTTTTGGCCATATGCCACCCTCTGAGGTACATATCTGAGGTACTGGTGA GCTGTATCCTCACCAGTGCCAGAGTTGCCAAAATGGGGCTGTTGTTTCTCATTAAAAGAG AAACAACACTAAACTCATTAAAAGAAACAACTAACTCATGCTGTTAGTACTCCCATTTCC TTTCACTCTTACAAGGTTGACATATTGTAGGAAAAGCCTACTCTCTCATTCCTATTGTCT CCATCAGGATGTCAGGAAGCTGGCCTGCTCCGACAACACTGTCAACTTCTTCTATGGTTT CTTTCTTGCCCTCTGTATGATGTCAGAAAGTGTGTTCATTACTGTGTCTTATGTGCTCAT CCTGAAGACGATCATGGGAATTGGATCCCATAGGGAGCGGCTCAAGGCCCTCAACACCTG TGTCTCCCATATCTGTGCTGTGCTTATCTTCTATGCGCCCGTCATTGCTTTGGCATCCAT GCACTGCTTTGGCATCCATGAACTGCTTTGGCAAGCACAGGTCCCCACTGGCCATGATCC TCATTGCTGATGTTTTCTTGCTAGTGCCACCTCTTATGAATCCCATTGTATATTGTGTGA AGACACAGCAAATTCATGAAAAAGTTTTAGGAAAACTGGGTCTACAACAACGGTGTCAG |
| Conceptual translation |
MHLPNSSEIAITTFFLIGIPGLEHAHIWISVPICLMYLVAILGNCTILFVIRTEPSLHAP MYYFLSMLAVSDLGLSLSYLPTMLRIFVFNATGISSNARFAQEFFIHGFTDMESSVLLVM SFDR/LAICHPLRYISEVLVSCILTSARVAKMGLLFLIKRETTLNSL/RNNXMLLVL PFPFTLTRLTYCRKSLLSHSYCLHQDVRKLACSDNTVNFFYGFFLALCMMSESVFITVSY VLILKTIMGIGSHRERLKALNTCVSHICAVLIFYAPVIALASMHCFG//MNCFGKHRS PLAMILIADVFLLVPPLMNPIVYCVKTQQIHEKVLGKLGLQQRCQ Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | T/C | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
| 11 | 4,889,673 | 4,889,673 | SNP | C/T | 1000GP (CEU) | |
| 11 | 4,889,709 | 4,889,709 | SNP | G/A | 1000GP (CHBJPT) | |
| 11 | 4,890,064 | 4,890,064 | SNP | G/A | 1000GP (CEU) | |
| 11 | 4,890,544 | 4,890,544 | SNP | C/G | 1000GP (CEU) | |
| 11 | 4,910,903 | 4,910,903 | SNP | C/T | rs35678658 (DbSNP) | |
| 11 | 4,911,238 | 4,911,238 | Del(1) | -/A | rs35636691 (DbSNP) | |
| 11 | 4,911,564 | 4,911,564 | SNP | A/G | rs73405021 (DbSNP) | |
| 11 | 4,911,774 | 4,911,774 | SNP | C/G | rs17330155 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 4,907,893 | 5,135,331 | CopyNumber | Variation_3835 (DGV) |
| 11 | 4,908,808 | 4,911,926 | CopyNumber | #56 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.