OR51C1P Olfactory Receptor
| Gene Symbol | OR51C1P1 (View this gene in GeneCards) |
| Family | 51 |
| Subfamily | C |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.3.17P, ORL3440 |
| External Ids | HGNC: 15191 GeneBank: AB065521, NG_004228 ORDB: ORL3440 |
| Build #39 labels | OR51C1P, OR51C3P, OR51C2P |
| Chromosomal location | 11:4,690,761-4,691,702 (-) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR51C4P | 77.35% | 309 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Expression evidences
| Source | Accession |
|---|---|
| ESTs | DR005889 |
| mRNA | AK314051 |
| GNF Atlas2 | gnf1h05436_s_at |
| GNF Atlas2 | gnf1h10693_at |
Sequence information
| Nucleotide sequence |
ACGTCAACTTTGCAGAATATCACCTCCACTTCCATCATTTTCCTGCTCACTGGTGTTCCT GGGCTGGAAGCCTTCCACACCTGGATCTCCATTCCCTTCTGCTTCCTCTCTGTAACTGCT CTCTTGGGAAACAGCCTGATCCTCTTCGCTACCATCACTCAGCCCAGCCTCCACGAACCA ATGTACTATTTCCTCTCCATGCTGTCCGCCACTGACCTCGGCCTGTCCATATCCACTCTG GTCACCATGCTGAGTATATTCTGGTTCAATGTGAGGGAAATCAGCTTTAATGCCTGCTTG TCCCACATGTTCTTTATTAAATTCTTCACTGTCATGGAATCCTCAGTGCTGTTGGCCATG GCTTTTGATCGTTTTGTGGCCGTCTCTAATCCCCTTAGGTATGCCATGATTTTAACTGAC TCCAGAATAGCTCAAATTGGAGTGGCAAGTGTCATCAGGGGGCTCCTAATGCTGACACCA ATGGTAGCACTTCTTATAAGACTTTCCTACTGCCACAGCCAAGTACTCCACCACTCCTAC TGCTACCACCCTGATGTGATGAAGCTCTCATGCACAGACACCAGAATCAACAGTGCAGTT GGGCTGACTGCCATGTTCTCTACTGTTGGTGTAGACTTACTTCTCATCCTCCTTTCTTAT GTTTTGATCATTAGGACTGTCCTTAGCGTTGCTTCCCCAGAAGAGAGGAAGGAAACCTTC AGTACATGTGTCTCCCACATTGTGGCTTTTGCTATATATTACATTCCATTGATCAGTCTG TCCATTGTTCACAGATTTGGGAAACAAGCCCCAGCCTATGTACATACTATGATTGCTAAC ACCTACCTGCTGATCTCCCCTTTGATGAACCCTGTCATCTACAGTGTGAAAACCAAACAG ATACGTAGAGCTGTGATAAAAATTCTCCATTCCAAAGAAACA |
| Conceptual translation |
TSTLQNITSTSIIFLLTGVPGLEAFHTWISIPFCFLSVTALLGNSLILFATITQPSLHEP MYYFLSMLSATDLGLSISTLVTMLSIFWFNVREISFNACLSHMFFIKFFTVMESSVLLAM AFDRFVAVSNPLRYAMILTDSRIAQIGVASVIRGLLMLTPMVALLIRLSYCHSQVLHHSY CYHPDVMKLSCTDTRINSAV/ADCHVLYCWCRLTS\LLSYVLIIRTVLSVASPEERKE TFSTCVSHIVAFAIYYIPLISLSIVHRFGKQAPAYVHTMIANTYLLISPLMNPVIYSVKT KQIRRAVIKILHSKET Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 4,712,353 | 4,712,353 | SNP | C/T | rs11033352 (DbSNP) | |
| 11 | 4,712,562 | 4,712,562 | SNP | C/T | rs72865883 (DbSNP) | |
| 11 | 4,712,079 | 4,712,079 | SNP | G/A | rs1505192 (DbSNP) | |
| 11 | 4,690,849 | 4,690,849 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 11 | 4,691,123 | 4,691,123 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 11 | 4,691,169 | 4,691,169 | SNP | G/A | 1000GP (CHBJPT) | |
| 11 | 4,691,561 | 4,691,561 | SNP | G/A | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | T/C | 1000GP (YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.