OR51C4P Olfactory Receptor
| Gene Symbol | OR51C4P1 (View this gene in GeneCards) |
| Family | 51 |
| Subfamily | C |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.3.19P |
| External Ids | HGNC: 31280 GeneBank: NG_004322 |
| Build #39 labels | OR51C4P |
| Chromosomal location | 11:4,718,612-4,719,559 (+) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR51C1P | 77.35% | 309 |
| OR51F3P | 73.09% | 301 |
| OR51F4P | 75.33% | 300 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Sequence information
| Nucleotide sequence |
ATGTCAACTTTGCAGAATATCACCTCCACTTCCATCATTTTCCTGCTCCCTGGTGTTCCT GGGCTGGAAGCCTTCCACACCTGGATCTCCATTCCCTTCTGCTTCCTCTATGTAACTGCC CTCTCAGGAAACAGCCTGATCCTCTTTGCCATCGTTACTCAGCCCAGCCTCCACGAACCC ATGTATTATTTCCTCTCCATGCTGTCCACCACTGACCTCGGCCTGTCCATATCCACTCTG GTCACCATTCTGGGTATATTCTGCTTCAATGTGAGGGAAATCAGCTTTAATGCCCGCTTG TCCCAGATGTTCTTTCTTCAACTCTTCACTGTCATGGAATCTTCAGTGCTGTTGGCCATG GCTTTTGATCGTTTTGTGGCCATTACTAATCCTCTTAGATATGCTTCTGTCTTAACTGAT CTTAAAATAGCACAGATTTGAGTAGCAATTATCACCAGGGGAACAATAACACTGACTCCT ATGGTGTTGCTTCTTAAAAGACTGTCCTACTGCTGCAGCCACGTGCTCCACCACTCCTAT TGCTTTTACCCTGATGTGATGAAGCTCTCATGCACAGACACCAGGATCAACAGTGCAGTT GGGCTGACTGCCCTGATTACCACTGCTGGGGCAGATTCTGTCTTTATTGTCCTGTCTTAT ATTTTGATCATTAAGACTGTTCTCAGCATTGCTTCCCCGGAAGAAAGGAAGAAAGCCTTC AGCACATGTATCTCCCATATTGGGGCTGTTGCTGTATTTTACATTCCATTGATCACTCTG TCCTTTGTTCACAGGTTTGGGAAGCAGGCCCCACCCTATGTGCATACTTTGATTGCCAAT GCCTACCTACTAATCCCTCCTGTAATGAACCCCATCATCTACAGTGTGAAGACCAAACAG ATACGCTAGGCTGTGCTAAAAGTACTCCATTGTAGCACGGCAAAGAAC |
| Conceptual translation |
MSTLQNITSTSIIFLLPGVPGLEAFHTWISIPFCFLYVTALSGNSLILFAIVTQPSLHEP MYYFLSMLSTTDLGLSISTLVTILGIFCFNVREISFNARLSQMFFLQLFTVMESSVLLAM AFDRFVAITNPLRYASVLTDLKIAQIXAIITRGTITLTPMVLLLKRLSYCCSHVLHHSY CFYPDVMKLSCTDTRINSAVGLTALITTAGADSVFIVLSYILIIKTVLSIASPEERKKAF STCISHIGAVAVFYIPLITLSFVHRFGKQAPPYVHTLIANAYLLIPPVMNPIIYSVKTKQ IRXVLKVLHCSTAKN Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 4,740,665 | 4,740,665 | SNP | A/G | rs4498989 (DbSNP) | |
| 11 | 4,740,745 | 4,740,745 | SNP | C/T | rs7104128 (DbSNP) | |
| 11 | 4,719,435 | 4,719,435 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 11 | 4,719,515 | 4,719,515 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 11 | 4,718,987 | 4,718,987 | SNP | G/T | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.