OR51E1 Olfactory Receptor
| Gene Symbol | OR51E11 (View this gene in GeneCards) |
| Family | 51 |
| Subfamily | E |
| Pseudogene | No |
| CORP pseudogene probability score | |
| Aliases | OR11-15, HsOR11.3.14, ORL3299 |
| External Ids | HGNC: 15194 GeneBank: AB065787, AY698056, AY775731, BC022401, BK004369, NG_004227, NM_152430 ORDB: ORL3299 |
| Build #39 labels | OR51E1, OR52A3P |
| Chromosomal location | 11:4,652,527-4,653,480 (+) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR51D1 | 60% | 310 |
| Mouse | Or51e1 | 94% | 316 |
| Rat | Or51e1 | 93% | 315 |
| Cow | OR51D1 | 59% | 310 |
| Orang | OR51E2 | 60% | 306 |
| Horse | OR51D1 | 59% | 310 |
| Chimp | OR51E2 | 60% | 306 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | DY308798 |
| mRNA | AK023643 |
Sequence information
| Nucleotide sequence |
ATGATGGTGGATCCCAATGGCAATGAATCCAGTGCTACATACTTCATCCTAATAGGCCTC CCTGGTTTAGAAGAGGCTCAGTTCTGGTTGGCCTTCCCATTGTGCTCCCTCTACCTTATT GCTGTGCTAGGTAACTTGACAATCATCTACATTGTGCGGACTGAGCACAGCCTGCATGAG CCCATGTATATATTTCTTTGCATGCTTTCAGGCATTGACATCCTCATCTCCACCTCATCC ATGCCCAAAATGCTGGCCATCTTCTGGTTCAATTCCACTACCATCCAGTTTGATGCTTGT CTGCTACAGATGTTTGCCATCCACTCCTTATCTGGCATGGAATCCACAGTGCTGCTGGCC ATGGCTTTTGACCGCTATGTGGCCATCTGTCACCCACTGCGCCATGCCACAGTACTTACG TTGCCTCGTGTCACCAAAATTGGTGTGGCTGCTGTGGTGCGGGGGGCTGCACTGATGGCA CCCCTTCCTGTCTTCATCAAGCAGCTGCCCTTCTGCCGCTCCAATATCCTTTCCCATTCC TACTGCCTACACCAAGATGTCATGAAGCTGGCCTGTGATGATATCCGGGTCAATGTCGTC TATGGCCTTATCGTCATCATCTCCGCCATTGGCCTGGACTCACTTCTCATCTCCTTCTCA TATCTGCTTATTCTTAAGACTGTGTTGGGCTTGACACGTGAAGCCCAGGCCAAGGCATTT GGCACTTGCGTCTCTCATGTGTGTGCTGTGTTCATATTCTATGTACCTTTCATTGGATTG TCCATGGTGCATCGCTTTAGCAAGCGGCGTGACTCTCCGCTGCCCGTCATCTTGGCCAAT ATCTATCTGCTGGTTCCTCCTGTGCTCAACCCAATTGTCTATGGAGTGAAGACAAAGGAG ATTCGACAGCGCATCCTTCGACTTTTCCATGTGGCCACACACGCTTCAGAGCCC |
| Conceptual translation |
MMVDPNGNESSATYFILIGLPGLEEAQFWLAFPLCSLYLIAVLGNLTIIYIVRTEHSLHE PMYIFLCMLSGIDILISTSSMPKMLAIFWFNSTTIQFDACLLQMFAIHSLSGMESTVLLA MAFDRYVAICHPLRHATVLTLPRVTKIGVAAVVRGAALMAPLPVFIKQLPFCRSNILSHS YCLHQDVMKLACDDIRVNVVYGLIVIISAIGLDSLLISFSYLLILKTVLGLTREAQAKAF GTCVSHVCAVFIFYVPFIGLSMVHRFSKRRDSPLPVILANIYLLVPPVLNPIVYGVKTKE IRQRILRLFHVATHASEP Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 4,674,683 | 4,674,682 | Ins(1) | -/T | rs36005201 (DbSNP) | |
| 11 | 4,674,255 | 4,674,255 | NS | A/C | K/Q | rs61883652 (DbSNP) |
| 11 | 4,674,282 | 4,674,282 | NS | A/G | I/V | rs61746313 (DbSNP) |
| 11 | 4,673,788 | 4,673,788 | NS | A/G | N/S | rs17224476 (DbSNP) |
| 11 | 4,674,575 | 4,674,575 | SYN | A/G | P/P | rs3817098 (DbSNP) |
| 11 | 4,652,558 | 4,652,558 | NS | G/A | S/N | 1000GP (CEU) |
| 11 | 4,653,345 | 4,653,345 | SYN | G/A | P/P | 1000GP (CEU, CHBJPT) |
| 11 | 100 | -100 | SYN | G/A | P/P | 1000GP (YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 4,673,657 | 4,676,710 | CopyNumber | #52 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
| S10N | % Freq | CORP | |
|---|---|---|---|
| 1 | S | 94.55 | 0.038 |
| 2 | N | 5.45 | 0.038 |
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR51E1.aApr07 | exon_5UTR | chr11 | 4,643,420 | 4,644,030 | + | |
| main_exon | 5UTR | chr11 | 4,652,488 | 4,652,527 | + | |
| CDS | chr11 | 4,652,527 | 4,653,480 | + | ||
| 3UTR | chr11 | 4,653,480 | 4,655,487 | + | ||
| OR51E1.bApr07-unspliced | main_exon | 5UTR | chr11 | 4,652,330 | 4,652,527 | + |
| CDS | chr11 | 4,652,527 | 4,653,480 | + | ||
| 3UTR | chr11 | 4,653,480 | 4,655,484 | + | ||
| OR51E1.cApr07 | exon_5UTR | chr11 | 4,644,024 | 4,644,030 | + | |
| main_exon | CDS_partial | chr11 | 4,653,327 | 4,653,480 | + | |
| 3UTR | chr11 | 4,653,480 | 4,653,614 | + | ||