OR51F3P Olfactory Receptor
| Gene Symbol | OR51F3P1 (View this gene in GeneCards) |
| Family | 51 |
| Subfamily | F |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.3.20P |
| External Ids | HGNC: 31281 GeneBank: NG_004323 |
| Build #39 labels | |
| Chromosomal location | 11:4,736,178-4,737,078 (-) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR51C4P | 73.09% | 301 |
| OR51F4P | 71.04% | 297 |
| OR51F5P | 70.85% | 295 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR51F23 | 76% | 301 |
| Mouse | Or51f23 | 74% | 300 |
| Rat | Or51f4 | 74% | 301 |
| Cow | OR51F17P | 77% | 301 |
| Orang | OR51F3 | 90% | 297 |
| Horse | OR51F23F | 77% | 301 |
| Chimp | OR51F3 | 91% | 301 |
Sequence information
| Nucleotide sequence |
TCCTCTTCTCTGATCTTTTTCCTGACTGGAGTTCCAGGACTAGAAGTTGCTCATGCCTGG ATCTCCATCCCCTTCTGCTGTCTCTACATAACTGCTCTCTCTGGAAATGGTGTCATTCTA TTTGTCATCATCACTGAGTCCAGTCTCCACGAACCTATGTACTATTTCCTCTCTATGCTC TCAACCACAGACCTGGGCTTGTGTGTTTCGACACTAGTCACTATGCTGGGCATATTCTGG TTCAATGCAAGACAGATCAGTTTCCACGCCTGTGTTGCCCAGACGTTCTTCATTCAACTT TTTACTGTCATGGAGTCCTCAGTGCTTCTGGCAATGGCCTTTGATCGCTTCATTGCCATT TGTAACCCCCCGAGGTATACTACCATCTTGACTGATTCCAGGATCGTCAAAGTATGGTTT GCCATCCTTGTCAGGGGGACCGTGATCCTATTGCCTCTGGCCCTACTTCTTAAACATGTC CTTCTGCCAAAGTCATGTGCTCCATCATTCCTACTGTTTCCATCCTGATATCATCCAGCT GTCATGTTCTGACAATAAGATCAACAGTGTTTTAGGACTCACTGCCCTCATAGTTACTGC AGGAGTGGACTCCATCTTTATTCTTCTCTCCTATATCCTGATTATTAAGACCGTCCTAAG CATTGCTTCCCCAGAGGAGCGGCATAAGGTCTTTAGCACTTGTATCTCCTACATAGGTGC TGTTGCCATTTTCTACATCCCTCTCATTAGTTTGTGCTTTGTCCATAGGTTTGGGAAAAG AGCGCCTCCTTATGCCCACACTCTTATGGCCAATGCATATTTGCTTATTCCACCAGTGAT GAATCCTATTATTTATAGTGTGAAAACCAAGCAGATCCGTAGGGCCATTAAAAAAATCCT T |
| Conceptual translation |
SSSLIFFLTGVPGLEVAHAWISIPFCCLYITALSGNGVILFVIITESSLHEPMYYFLSML STTDLGLCVSTLVTMLG/ILVQCKT\SFHACVAQTFFIQLFTVMESSVLLAMAFDRFI AICNPPRYTTILTDSRIVKVWFAILVRGTVILLPLALLLK\SFCQSHVLHHSYCFHPDI IQLSCSDNKINSVLGLTALIVTAGVDSIFILLSYILIIKTVLSIASPEERHKVFSTCISY IGAVAIFYIPLISLCFVHRFGKRAPPYAHTLMANAYLLIPPVMNPIIYSVKTKQIRRAIK KIL Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 4,757,506 | 4,757,506 | SNP | A/G | rs12365096 (DbSNP) | |
| 11 | 4,757,938 | 4,757,938 | SNP | A/G | rs10742372 (DbSNP) | |
| 11 | 4,758,120 | 4,758,120 | SNP | A/T | rs10734443 (DbSNP) | |
| 11 | 4,758,152 | 4,758,152 | SNP | C/T | rs11033618 (DbSNP) | |
| 11 | 4,757,492 | 4,757,492 | SNP | C/T | rs10836558 (DbSNP) | |
| 11 | 4,736,262 | 4,736,262 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 11 | 4,736,534 | 4,736,534 | SNP | A/C | 1000GP (CEU) | |
| 11 | 4,736,538 | 4,736,538 | SNP | C/T | 1000GP (CEU) | |
| 11 | 4,736,708 | 4,736,708 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 4,736,890 | 4,736,890 | SNP | T/A | 1000GP (CEU) | |
| 11 | 4,736,922 | 4,736,922 | SNP | T/C | 1000GP (CEU) | |
| 11 | 100 | -100 | SNP | T/C | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 85 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.