OR51H1P Olfactory Receptor
| Gene Symbol | OR51H1P (View this gene in GeneCards) |
| Family | 51 |
| Subfamily | H |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-25, HsOR11.3.28 |
| External Ids | GeneBank: AB065527, BK004279, NG_004388 |
| Build #39 labels | OR51H1 |
| Chromosomal location | 11:4,859,620-4,860,564 (-) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR51H2P | 62.38% | 311 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Expression evidences
| Source | Accession |
|---|---|
| GNF Atlas2 | gnf1h11156_at |
Sequence information
| Nucleotide sequence |
ATGACGAACTTGAATGCATCACAGGCCAACCACCGTAACTTCATTCTGACAGGTATCCCA GGAACGCCAGACAAGAACCCATGGTTGGCCTTTCCCCTGGGATTTCTCTACACACTCACA CTCCTGGGAAATGGTACCATCCTAGCTGTCATCAAGGTGGAGCCAAGTCTCCATGAGCCC ACGTATTACTTCCTTTCTATCTTGGCTCTCACTGACGTTAGTCTCTCCATGTCCACCTTG CCCTCCATGCTCAGCATCTACTGGTTTAATGCCCCTCAGATTGTTTTTGATGCATGCATC ATGCAGATGTTCTTCATCCATGTATTTGGAATAGTAGAATCAGGAGTCCTAGTGTCCATG GCCTTTGACAGATTTGTGGCCATCCGAAACCCATTACACTATGTTTCCATCCTCACTCAC GATGTTATTCGAAAGACTGGAATAGCTGTCCTCACCCGGGCAGTCTGTGTGGTATTCCCT GTGCCCTTCCTTATAAAGTGCCTACCCTTCTGCCATTCCAATGTCTTGTCTCATTCATAC TGTCTTCACCAAAACATGATGCGGCTAGCTTGTGCCAGCACCCGCATCAACAGCCTCTAC GGCCTCATCGTCGTCATCTTCACACTGGGGCTCGATGTTCTCCTCACTCTACTGTCTTAT GTACTCACCCTGAAGACTGTGCTGGGCATTGTCTCCAGAGGTGAAAGGCTGAAAACCCTC AGCACATGCCTCTCTCACATGTCTACCGTGCTCCTCTTCTATGTTCCTTTTATGGGTGCT GCCTCCATGATCCACAGATTTTGGGAGCATTTATCACCAGTAGTGCACATGGTCATGGCT GATATATACCTACTGCTCCCGCCTGTGCTAAACCCCATTGTCTACAGTGTGAAGACCAAG CAAATTTGAAGAATGATCTTTCAAGTGTTCCAGAGGCAAAAAAAA |
| Conceptual translation |
MTNLNASQANHRNFILTGIPGTPDKNPWLAFPLGFLYTLTLLGNGTILAVIKVEPSLHEP TYYFLSILALTDVSLSMSTLPSMLSIYWFNAPQIVFDACIMQMFFIHVFGIVESGVLVSM AFDRFVAIRNPLHYVSILTHDVIRKTGIAVLTRAVCVVFPVPFLIKCLPFCHSNVLSHSY CLHQNMMRLACASTRINSLYGLIVVIFTLGLDVLLTLLSYVLTLKTVLGIVSRGERLKTL STCLSHMSTVLLFYVPF\VLPPXTDFG/HLSPVVHMVMADIYLLLPPVLNPIVYSVK TKQIXMIFQVFQRQKK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | T/C | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
| 11 | 4,859,662 | 4,859,662 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 11 | 4,859,762 | 4,859,762 | SNP | C/G | 1000GP (CEU, CHBJPT) | |
| 11 | 4,859,872 | 4,859,872 | SNP | G/A | 1000GP (CEU) | |
| 11 | 4,880,892 | 4,880,892 | SNP | C/T | rs11034368 (DbSNP) | |
| 11 | 4,880,992 | 4,880,992 | SNP | C/G | rs7947547 (DbSNP) | |
| 11 | 4,881,011 | 4,881,010 | Ins(1) | -/G | rs35010910 (DbSNP) | |
| 11 | 4,881,020 | 4,881,020 | SNP | C/T | rs61710756 (DbSNP) | |
| 11 | 4,881,079 | 4,881,079 | SNP | A/G | rs74054606 (DbSNP) | |
| 11 | 4,881,252 | 4,881,252 | SNP | A/G | rs16906807 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 4,878,850 | 4,881,894 | CopyNumber | #55 (Waszak) |
| 11 | 4,880,507 | 4,889,847 | CopyNumber | Variation_65846 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.