OR51N1P Olfactory Receptor
| Gene Symbol | OR51N1P1 (View this gene in GeneCards) |
| Family | 51 |
| Subfamily | N |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-20, HsOR11.3.23P, ORL3486 |
| External Ids | HGNC: 14757 GeneBank: AB065528, BK004770, NG_004281 ORDB: ORL3486 |
| Build #39 labels | OR51N1P |
| Chromosomal location | 11:4,786,754-4,787,702 (+) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR51F1 | 58.79% | 313 |
| OR51F2 | 57.91% | 316 |
| OR51F5P | 56.55% | 313 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR51F1 | 62% | 317 |
| Mouse | Or51f1 | 61% | 310 |
| Rat | Or51f1 | 60% | 310 |
| Cow | OR51F1B | 61% | 313 |
| Orang | OR51F2 | 58% | 317 |
| Horse | OR51F1 | 61% | 313 |
| Chimp | OR51N1 | 98% | 258 |
Sequence information
| Nucleotide sequence |
ATGCCACACCTCAGCAACACCACATCTGAGTTCCCAATCTTCCTCCTAACAGGCTTCCCT GGGCTGGAGGCCTTCCACATCTGGATCTCAATTCCCTTCTTCCTTCTGAGCACAGTTGCT CTCTTAGGGAACAGCATGATCCTATTGGTTGTTATTCTGGAGCCAAACCTCCATGAACCC ATGTACTGTTTTCTCTTCATGCTGTCTGCCGCTGACCTGGGGCTGACCCTCTCCACAATG CCCACGACCCTCAGTGTCCTCTGGTTCAGTGCACGTGAAATCATCCTCAATGCATGTATC ATCCAGCTCTTTTTCCTCCACAGCTCTGGCTTTATGGAATCCTCAGTACTGATGGCCATG GCTTTTGACCGCTTTGTTGCCATTTGCAGACCCCTCAGATATGCTACCATCCTGACAGAC TCCAGAATTCTAAAGATTGGTGTAGCAATAGTCCTAAGAACATTGATCAGCCTCTGTCCA TCCCTCTTTCTCATTAAGAGACTGTCATTTTGCAAAGTCAATGTCCTTTCCCATTCTTAC TGCTTCCACCCTGATGCGCTTAAAGTTGCATGTTCTGATTCAAGGATGAACAGCTATGGA GGCTTAGCTGTTCTCATTCTGGTCACCGGGGTTGGTACACCATGTGTTGCGCTTTCCTAC ATCCTGATAATCCACTCTGTACTAAACATCATCTCTTCAGAGGGACGGAGGAAGGCCTTC GACACTTGTGGATCTCACATTGGGGCAGTTGCAGTCTTCTACATTCCCTGGGTTGTTCTT TCAGTTGTCCACAGATTTTTCCACAAGGCTTCACCAATATGTCCACCCACTATTGTCCAA CATCTATTTCCTTGGCCCCTCTCGGCTGAACCCCATCATATATAGTGTGAAGACTAAACA AATCCGCAGGGCTATCCTCAAACTCTTTCAAACAAAATCAAAAGAAATG |
| Conceptual translation |
MPHLSNTTSEFPIFLLTGFPGLEAFHIWISIPFFLLSTVALLGNSMILLVVILEPNLHEP MYCFLFMLSAADLGLTLSTMPTTLSVLWFSAREIILNACIIQLFFLHSSGFMESSVLMAM AFDRFVAICRPLRYATILTDSRILKIGVAIVLRTLISLCPSLFLIKRLSFCKVNVLSHSY CFHPDALKVACSDSRMNSYGGLAVLILVTGVGTPCVALSYILIIHSVLNIISSEGRRKAF DTCGSHIGAVAVFYIPWV/SFSCP/DFSTRLHQYVHPLLSNIYFLGPSRLNPIIYSVK TKQIRRAILKLFQTKSKEM Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 4,808,214 | 4,808,214 | SNP | A/C | rs34775015 (DbSNP) | |
| 11 | 4,808,289 | 4,808,289 | SNP | A/G | rs11033880 (DbSNP) | |
| 11 | 4,808,098 | 4,808,098 | SNP | A/G | rs34012768 (DbSNP) | |
| 11 | 4,808,227 | 4,808,227 | SNP | A/G | rs11033879 (DbSNP) | |
| 11 | 4,808,425 | 4,808,425 | SNP | A/G | rs17227978 (DbSNP) | |
| 11 | 4,808,459 | 4,808,459 | SNP | C/G | rs16938620 (DbSNP) | |
| 11 | 4,808,532 | 4,808,532 | SNP | C/T | rs34231378 (DbSNP) | |
| 11 | 4,808,307 | 4,808,307 | SNP | C/T | rs17227928 (DbSNP) | |
| 11 | 4,808,689 | 4,808,689 | SNP | C/T | rs73401035 (DbSNP) | |
| 11 | 4,808,133 | 4,808,133 | SNP | C/T | rs17325567 (DbSNP) | |
| 11 | 4,786,868 | 4,786,868 | SNP | G/A | 1000GP (CEU) | |
| 11 | 4,786,903 | 4,786,903 | SNP | T/C | 1000GP (CEU) | |
| 11 | 4,786,984 | 4,786,984 | SNP | C/A | 1000GP (CEU) | |
| 11 | 4,786,997 | 4,786,997 | SNP | A/G | 1000GP (CEU) | |
| 11 | 4,787,077 | 4,787,077 | SNP | C/T | 1000GP (CEU) | |
| 11 | 4,787,195 | 4,787,195 | SNP | G/A | 1000GP (CEU) | |
| 11 | 4,787,302 | 4,787,302 | SNP | C/T | 1000GP (CEU) | |
| 11 | 4,787,311 | 4,787,311 | SNP | G/A | 1000GP (CEU) | |
| 11 | 4,786,964 | 4,786,964 | SNP | G/A | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.