OR52E3P Olfactory Receptor
| Gene Symbol | OR52E3P1 (View this gene in GeneCards) |
| Family | 52 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.3.47P, ORL3496 |
| External Ids | HGNC: 14793 GeneBank: NG_002269 ORDB: ORL3496 |
| Build #39 labels | OR52E3P |
| Chromosomal location | 11:5,092,676-5,093,608 (+) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR52E2 | 84.24% | 311 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR52E2B | 84% | 311 |
| Dog | OR52E2 | 83% | 311 |
| Mouse | Or52e3 | 86% | 311 |
| Rat | Or52e3 | 85% | 311 |
| Cow | OR52E3 | 84% | 311 |
| Cow | OR52E2P | 82% | 308 |
| Cow | OR52E3BP | 81% | 305 |
| Orang | OR52E3 | 93% | 311 |
| Horse | OR52E3 | 84% | 311 |
| Horse | OR52E2 | 83% | 311 |
| Chimp | OR52E3 | 96% | 311 |
Sequence information
| Nucleotide sequence |
ATGTTCCTTCCCAATAACACCCAGTTTCACCCCTCCTCCTTCCTGTTGCTGGGGATCCCA GGGCTAGAAACACTTCACATCTGGATCGGCTTTCCCTTTTGTGCTGTGTACATAATTGCA CTCATAGGGCGCTTCACTATTCTACTTGTGATCAAGACTGACAGCAGCCTATACCAGCCC ATGTTCTACTTCCTGGCCATGTTGGCCACCATTGACTTGGGCCTTTCAACAGCTACCATC CCTAAGATGCTTGGGATCTTCTGGTTTAGCCTCAGGGAGATTATCTGTGATGCCTGCCTC ATCCAGATGTTTTTCATCCACAACTTTACTGGCATGGAGTCAGCAGCCCTCGTGGGAATG GCTTATGACCACTTTGTGGCCATCTGCAACCCGCTACGATATAGCATCATCCTCACCAAA AAGGCTGTTTCTGTGATTGGTCTTGGTGTGTTAGTGAGGTCATTTATGTCTGTTATTCCA TTTGTTTTTCTCATTTTGCGGTTGCCCTTCTGTGGGGATCATGTCATTCCCCACACCAAC TGTGAGCACATGGGTCTTGCTCATCTGTCTTGTTCCAGTATCAAGATCAATATAATCTAT GGCTTGGGTGCTATTTCAATCCTAGTATTCGACATCATAGCCATTGCCCTTTCTTATGTG CAAATACTTCACGCTGTTTTCCATCTTCCTTCCTGTAAAGCCTGACTCAAGTCCCTCAGC ACATGTGGTTCACATGTGTGTGTAATCCTTGCCTTCTATACACCAGCCCTCTTTTCCTTT GTGACTCATCGCTTTGGCCAAAATGTGCCCCGCTATATCCATATACTCCTAGCCAATCTC TATGTTGTGGTGCCACCAATGCTCAATCCTGTCATATATGGAGTCAGAACCAAGCAGATC TATGACTGTGTGAAGAAAATATTCTTACAAAAA |
| Conceptual translation |
MFLPNNTQFHPSSFLLLGIPGLETLHIWIGFPFCAVYIIALIGRFTILLVIKTDSSLYQP MFYFLAMLATIDLGLSTATIPKMLGIFWFSLREIICDACLIQMFFIHNFTGMESAALVGM AYDHFVAICNPLRYSIILTKKAVSVIGLGVLVRSFMSVIPFVFLILRLPFCGDHVIPHTN CEHMGLAHLSCSSIKINIIYGLGAISILVFDIIAIALSYVQILHAVFHLPSCKAXKSLS TCGSHVCVILAFYTPALFSFVTHRFGQNVPRYIHILLANLYVVVPPMLNPVIYGVRTKQI YDCVKKIFLQK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 5,114,762 | 5,114,762 | SNP | A/C | rs73394862 (DbSNP) | |
| 11 | 5,114,211 | 5,114,211 | SNP | T/G | rs1551489 (DbSNP) | |
| 11 | 5,092,981 | 5,092,981 | SNP | G/T | 1000GP (CEU) | |
| 11 | 5,093,189 | 5,093,189 | SNP | G/A | 1000GP (CEU) | |
| 11 | 5,093,281 | 5,093,281 | SNP | G/T | 1000GP (CEU, CHBJPT) | |
| 11 | 5,093,348 | 5,093,348 | SNP | G/A | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | T/C | 1000GP (YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 4,907,893 | 5,135,331 | CopyNumber | Variation_3835 (DGV) |
| 11 | 5,087,292 | 5,125,991 | CopyNumber | Variation_5421 (DGV) |
| 11 | 5,113,806 | 5,116,838 | Deletion | #197 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.