OR56A7P Olfactory Receptor
| Gene Symbol | OR56A7P1 (View this gene in GeneCards) |
| Family | 56 |
| Subfamily | A |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.3.95P, ORL3626 |
| External Ids | HGNC: 15244 GeneBank: NG_004214 ORDB: ORL3626 |
| Build #39 labels | OR56A7P |
| Chromosomal location | 11:6,045,810-6,046,747 (-) |
| Cluster | 11@6 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR56A1 | 82.11% | 313 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR56A1B | 82% | 314 |
| Dog | OR56A1 | 81% | 314 |
| Mouse | Or56a4 | 70% | 308 |
| Rat | Or56a5 | 67% | 312 |
| Cow | OR56A1 | 78% | 313 |
| Orang | OR56A1 | 81% | 313 |
| Horse | OR56A1 | 78% | 314 |
| Chimp | OR56A1 | 82% | 313 |
Sequence information
| Nucleotide sequence |
ATGACATTACCCAGCGATGACTCCACTGTCCCAGTCTCTGAATTCCTCCTCATCTGCTTC CCCAACTTTCAGAGTTGGCAGCACTTGCTGTCCCTGCCCCTCAGCCTCCTTTCCTCCTGG CCATGGGGACCAACACCCACCCCCCCCATCACCATCCACCTGGAGGCCTCTCTGCACCTG CCCCTGTACTACCTGCCCAGCCTCCTCTCCCTGCTGGACATCGTGCTCTGCCTCACCGTC ATCCCCAAGGTCCTGGCCATCTTCTGGTTTGATCTTAGGTCGATCGGCTTCCCTGCCTGC TTCCTTCAGATGTTCATCATGAACAGTTTCCTCCCCATGGAGTCCTGCACATTCATGGTC AAGGACTATGATCATTATGTGGCCATCTGCCACCCACTGCAGTACCTGTCCATCATCACT CATCAATTTGTGGCCAAAGCTAGTGTCTTCATTGTGGTGCAGAATGCTTTGCTGCTTTCA CCTGTTCCTATTCTCTCTGCCCAGCTCCATTACTGTAGGAAAAATGTGATTGAGAACTGC ATCTGTGCCAACCTGTCTGTGTCCAGGCTCTCCTGTGATAATTTCACCCTTAACAGACTC TACCAATTTGTGGCTGGTTGGACCTTCCTGGGCTCGGATTTCATCCTCATCTTCCTCTCC TACACCTTCATTCTAAGAGCTGTGCTTAGATTCAAGGTGGAGGGGGTGGCAGTGAAGGCC CTGAGCACATGTGGCTCCCACTTTATCCTCATCCTCTTCTTCAGCACCTGCTGGTTGTGG TGTTGACAAATGTGGCCAGAAAGAAGGTCCCCATGGACATCCTGATCCTGTTTAATGTCC TTCATCCCTTTAGTCCTCCTGCATTAAACCCTATCATATGTGGATTTCAAACTAAAGAGT TAAAGAAGGAATTTTAGAAGTTGCTGCAGAGGGGCCTT |
| Conceptual translation |
MTLPSDDSTVPVSEFLLICFPNFQSWQHLLSLPLSLLSSWPWGPTPTPPITIHLEASLHL PLYYLPSLLSLLDIVLCLTVIPKVLAIFWFDLRSIGFPACFLQMFIMNSFLPMESCTFMV KDYDHYVAICHPLQYLSIITHQFVAKASVFIVVQNALLLSPVPILSAQLHYCRKNVIENC ICANLSVSRLSCDNFTLNRLYQFVAGWTFLGSDFILIFLSYTFILRAVLRFKVEGVAVKA LSTCGSHFILILFFST/LVVVLTNVARKKVPMDILILFNVLHPFSPPALNPIICGFQTK ELKKEFXLLQRGL Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 6,067,902 | 6,067,901 | Ins(1) | -/C | rs11450639 (DbSNP) | |
| 11 | 6,067,962 | 6,067,962 | SNP | A/C | rs12794035 (DbSNP) | |
| 11 | 6,067,208 | 6,067,208 | SNP | A/C | rs7946120 (DbSNP) | |
| 11 | 6,067,928 | 6,067,928 | SNP | A/T | rs7936017 (DbSNP) | |
| 11 | 6,067,568 | 6,067,568 | SNP | C/G | rs74053074 (DbSNP) | |
| 11 | 6,067,516 | 6,067,516 | SNP | C/T | rs7125154 (DbSNP) | |
| 11 | 6,067,527 | 6,067,527 | SNP | C/T | rs73406066 (DbSNP) | |
| 11 | 6,067,869 | 6,067,869 | SNP | G/T | rs35950270 (DbSNP) | |
| 11 | 6,067,921 | 6,067,921 | SNP | G/T | rs12792426 (DbSNP) | |
| 11 | 6,045,978 | 6,045,978 | SNP | C/A | 1000GP (CEU, CHBJPT) | |
| 11 | 100 | -100 | SNP | C/A | 1000GP (YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 5,505,764 | 6,194,475 | CopyNumber | Variation_34458 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.