OR5AH1P Olfactory Receptor
| Gene Symbol | OR5AH1P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | AH |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR19.5.1P, ORL3776 |
| External Ids | HGNC: 14714 GeneBank: NG_002357 ORDB: ORL3776 |
| Build #39 labels | OR5AH1P |
| Chromosomal location | 19:56,760,864-56,761,232 (+) |
| Cluster | 19@57 |
| Synteny | CLIC#47 |
| Remarks | Disrupted by Sine |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR10A3 | 50.48% | 105 |
| OR10A6 | 50.48% | 105 |
| OR1L4 | 52.88% | 104 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR5BW1P | 68% | 111 |
| Mouse | Or5bw2 | 79% | 107 |
| Rat | Or9e1b | 66% | 101 |
| Cow | OR9E2 | 59% | 103 |
| Orang | OR1L4P | 53% | 104 |
| Horse | OR5BW3 | 84% | 108 |
| Chimp | OR10A6 | 51% | 105 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | DB469055 |
Sequence information
| Nucleotide sequence |
ATGTCTGGCTCCCCCACTCAACTGACAGCAGGCCCCAGGACAGCCAGTGGCTGTGTCATC ATGATCTGCTTTGCCCTCACTGTCCTCTCTTACATCCGCATCTTGGCCACAGTGGTTCAG ATCCGTTCAGCAGCCAGCCGCCGGAAGGCCTTCTCCACCTGTTCTTCCCACCTGGGCATG GTGCTCCTGTTCTATGGCACCGGCAGCTCCACCTACATGCGACCCACCACCCGCTACTCC CCGCTGGAAGGGCGCTTGGCTGCTGTCTTCTACTCCATCCTCATACCCACCCTGAATCCG CTCATCTACAGCCTGAGGAACCAGGACATGAAGAGAGCCCTGTGGAAGCTCTATCTCCAG GTGCCATAC |
| Conceptual translation |
MSGSPTQLTAGPRTASGCVIMICFALTVLSYIRILATVVQIRSAASRRKAFSTCSSHLGM VLLFYGTGSSTYMRPTTRYSPLEGRLAAVFYSILIPTLNPLIYSLRNQDMKRALWKLYLQ VPY Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 19 | 100 | -100 | SNP | T/A | 1000GP (YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR5AH1P.aApr07 | exon_5UTR | chr19 | 56,690,684 | 56,690,745 | + | |
| exon_5UTR | chr19 | 56,759,817 | 56,759,969 | + | ||
| main_exon | CDS_partial | chr19 | 56,760,976 | 56,761,135 | + | |