OR5AK1P Olfactory Receptor
| Gene Symbol | OR5AK1P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | AK |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-220, HsOR11.11.97P, ORL3570 |
| External Ids | HGNC: 15250 GeneBank: BK004783, NG_004213 ORDB: ORL3570 |
| Build #39 labels | OR5AK1P, OR5AK5P |
| Chromosomal location | 11:57,018,091-57,019,018 (+) |
| Cluster | 11@57 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5AK2 | 89.64% | 309 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR5AK7 | 79% | 309 |
| Mouse | Or5ak25 | 75% | 308 |
| Rat | Or5ak25 | 76% | 308 |
| Cow | OR5AK7 | 78% | 307 |
| Orang | OR5AK1 | 90% | 309 |
| Horse | OR5AK35 | 77% | 309 |
| Chimp | OR5AK2 | 90% | 309 |
Sequence information
| Nucleotide sequence |
ATGGCATGAGGAAACAGCACTGAAGTGACTGAATTCTGTCTTCTGGGATTTGGTGCCTAG CAAGAGTTTTGGTGTATCCTCTTCATTATATTCCTTCTCATCTATGTGACCTCCATAATG GGTAATAGTGGAATAATCTTACTCATCAACACAGATTCCAGATTTCAAACACCCATGTAC TTTTTTCTACAACATTTGGCTTTTGTTGATATCTGTTACACTTCTGCTATCACTCCCAAG ATGCTCCAAAGCTTCACGGAAGAAAAGAATTTGATATCATTTTGGGGCTGCATGATACAA TTATTGGTTTATGCAACATTTGCAACCAGTGACTGTTATCTCCTGGCTATGATAGCAGTG GACCATTATGTTGCAATCTGTAAGCCCCTTCACTATACCGTAATCACGTCCCAAACAGTC TGCATCCATTTGGTAGCTGGTTCATACATCATGGGCTCAATAAATGCCTCTGTACATACA GGTTTTGCATTTTCACTGTCTTTCTGCAAGTCCAATAACATCAACCACTTTTTCTGTGAT GGTCCCCCAATTCTTGCCCTTTCATGCTCCAATATTGACATCAACATCATGCTACTTGTT GTCTTTGTGGGATTTAACTTGATGTTCACTGGGTTGGTAGTCATCTTTTCCTACATCTAC ATCATGGCCACCATCCTGAAAATGTCTTCTAGTGCAGGAAGGAAAAAATCCTTCTCAACA TGTGCCTCCCACCTGACCACAGTTGCCATTTTCTATGGGACACTCTCTTACATGCACTTA CCAGTCTCATTCTAATAATTCCCAGGAGAATATGAAAGTGGCCTCTATATTTTATGGCAC TGTTATTCCCATGTTGAATCCTTTAATCTATAGCTTGAGAAATAAGGAAGTAAAAGAAGC TTTAAAATTGATAGGGAAAAAGTTCTTT |
| Conceptual translation |
MAXNSTEVTEFCLLGFGAXEFWCILFIIFLLIYVTSIMGNSGIILLINTDSRFQTPMY FFLQHLAFVDICYTSAITPKMLQSFTEEKNLISFWGCMIQLLVYATFATSDCYLLAMIAV DHYVAICKPLHYTVITSQTVCIHLVAGSYIMGSINASVHTGFAFSLSFCKSNNINHFFCD GPPILALSCSNIDINIMLLVVFVGFNLMFTGLVVIFSYIYIMATILKMSSSAGRKKSFST CASHLTTVAIFYGTLSYMHL\SHSNNSQENMKVASIFYGTVIPMLNPLIYSLRNKEVKE ALKLIGKKFF Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 56,785,610 | 56,785,609 | Ins(1) | -/G | rs35451288 (DbSNP) | |
| 11 | 56,786,394 | 56,786,394 | SNP | A/G | rs12804126 (DbSNP) | |
| 11 | 56,786,373 | 56,786,373 | SNP | A/G | rs11228872 (DbSNP) | |
| 11 | 56,786,219 | 56,786,219 | SNP | C/T | rs7940765 (DbSNP) | |
| 11 | 56,785,625 | 56,785,625 | SNP | G/T | rs10792074 (DbSNP) | |
| 11 | 57,018,150 | 57,018,150 | SNP | G/T | 1000GP (CEU, CHBJPT) | |
| 11 | 57,018,744 | 57,018,744 | SNP | C/T | 1000GP (CEU) | |
| 11 | 57,018,919 | 57,018,919 | SNP | A/G | 1000GP (CEU) | |
| 11 | 100 | -100 | SNP | A/G | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.