OR5AK3P Olfactory Receptor
| Gene Symbol | OR5AK3P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | AK |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.11.95 |
| External Ids | HGNC: 15252 GeneBank: AB065497, NG_004212 |
| Build #39 labels | OR5AK3 |
| Chromosomal location | 11:56,971,050-56,971,976 (+) |
| Cluster | 11@57 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5AK1P | 83.12% | 308 |
| OR5AK2 | 83.39% | 307 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR5AK7 | 79% | 308 |
| Mouse | Or5ak24 | 76% | 308 |
| Rat | Or5ak24 | 76% | 308 |
| Cow | OR5AK7 | 79% | 307 |
| Orang | OR5AK1 | 82% | 308 |
| Horse | OR5AK35 | 79% | 308 |
| Chimp | OR5AK3 | 99% | 298 |
Expression evidences
| Source | Accession |
|---|---|
| GNF Atlas2 | gnf1h11096_at |
Sequence information
| Nucleotide sequence |
ATGGGTCGAGGAAACAGCACTGAAGTGACTGAATTCCATCTTCTGGGATTTGGTGTCCAA CACGAATTTCAGCATGTCCTTTTCATTGTACTTCTTCTTATCTATGTGACCTCCCTGATA GGAAATATTGGAATGATCTTACTCATCAAGACCGATTCCAGACTTCAAACACCCATGTAC TTTTTTCCACAACATTTGGCTTTTGTTGATATCTGTTATACTTCTGCTATCACTCCCAAG ATGCTCCAAAGCTTCACAGAAGAAAATAATTTGATAACATTTCGGGGCTGTGTGATACAA TTCTTAGTTTATGCAACATTTGCAACCAGTGACTGTTACCTCCTAGCTATTATGGCAATG GATTGTTATGTTGCCATCTGTAAGCCCCTTCGCTATCCCATGATCATGTCCCAAACAGTC TACATCCAACTCGTAGCTGGCTCATATATTATAGGCTCAATAAATGCCTCTGTACATACA GGTTTTACATTTTCACTGTCCTTCTGCAAGTCTAATAAAATCAATCACTTTTTCTGTGAT GGTCTCCCAATTCTTGCCCTTTCATGCTCCAACATTGACATCAACATCATTCTAGATGTT GTCTTTGTGGGATTTGACTTGATGTTCACTGAGTTGGTCATCATCTTTTCCTACATCTAC ATTATGGTCACCATCCTGAAGATGTCTTCTACTGCTGGGAGGAAAAAATCCTTCTCCACA TGTGCCTCCCACCTGACAGCAGTAACCATTTTCTATGGGACACTCTCTTACATGTACTTA CAGCCTCAGTCTAATAATTCTCAGGAGAATATGAAAGTAGCCTCTATATTTTATGGCACT GTTATTCCCATGTTGAATCCTTTAATCTATAGCTTGAGAAATAAGGAAGGAAAATAAGCT TTAAAAGTGATAGGAAAAAAGTTTTGT |
| Conceptual translation |
MGRGNSTEVTEFHLLGFGVQHEFQHVLFIVLLLIYVTSLIGNIGMILLIKTDSRLQTPMY FFPQHLAFVDICYTSAITPKMLQSFTEENNLITFRGCVIQFLVYATFATSDCYLLAIMAM DCYVAICKPLRYPMIMSQTVYIQLVAGSYIIGSINASVHTGFTFSLSFCKSNKINHFFCD GLPILALSCSNIDINIILDVVFVGFDLMFTELVIIFSYIYIMVTILKMSSTAGRKKSFST CASHLTAVTIFYGTLSYMYLQPQSNNSQENMKVASIFYGTVIPMLNPLIYSLRNKEGKX LKVIGKKFC Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 56,738,678 | 56,738,678 | SNP | A/G | rs7117365 (DbSNP) | |
| 11 | 56,738,965 | 56,738,965 | SNP | C/T | rs10501361 (DbSNP) | |
| 11 | 56,971,203 | 56,971,203 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 56,971,490 | 56,971,490 | SNP | C/T | 1000GP (CEU) | |
| 11 | 56,971,757 | 56,971,757 | SNP | A/G | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 56,600,799 | 56,750,463 | CopyNumber | Variation_0148 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.