OR5AN2P Olfactory Receptor
| Gene Symbol | OR5AN2P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | AN |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.13.1P, ORL3622 |
| External Ids | HGNC: 15256 GeneBank: AB065533, AF399368, AF546616-AF546629, NG_004210 ORDB: ORL3622 |
| Build #39 labels | OR5AN2P |
| Chromosomal location | 11:59,309,642-59,310,588 (-) |
| Cluster | 11@59a |
| Synteny | CLIC#27 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5AN1 | 67.21% | 308 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR5AN2 | 89% | 311 |
| Mouse | Or5an6 | 73% | 314 |
| Rat | Or5an6 | 73% | 314 |
| Cow | OR5AN2 | 83% | 314 |
| Orang | OR5AN2 | 97% | 316 |
| Horse | OR5AN2 | 85% | 311 |
| Chimp | OR5AN2 | 97% | 316 |
Expression evidences
| Source | Accession |
|---|---|
| GNF Atlas2 | gnf1h05547_at |
| GNF Atlas2 | gnf1h05548_s_at |
Sequence information
| Nucleotide sequence |
ATGACTGGGGAAAGGAACAGTACGAGAATTACAAAGTTCATTCTCTTGGGATTCTCTGAA TTTCCAAAGAACCCTATTTTCCTCTTTTCAATATTCCTAGGGATCTACCTCCTGACAGTG TCCTGGAACATAAACCTCATCACCCTTATCAGGACGACTCCCATCTGCATACACCTATGT ACTTTTTCCTTAGTAATCTGTCGTTTCTGGACATCTGCTATGTTTCCACTATAGCCCCCA AGATGCTCTCAGACTTCTTCAAGAAGCATAAATTCATCTCCTTTATGGGGTGCAGTATGC AGTACTTTTTCTTCTCTAGCCTAGGTCTAACTGAGTGCTGTCTTCTGGCAGCCATGGCTT ATGATCGATATGCTGCCATTTGCAACCCTCTGCTCTACAGGGCCATCATGTTTCCCACCC TCTGCGTGCAGATGGTGGCAGGATCTTGTATAACTGGATTCTTAGGCTCATTTATCCAAC TCTGTGCCTTGCTTCAGCTCCATTTCTGTGGGCCAAATGTCATCAACCATTTCTTCTGTG ATCTGCCCCAGCTGCTGATTCTATCCTGTTCTGACACCTTTTTCTTTCAAGTCATGACCT CTGTTCTCACAGTGATCTTTGGACTCACGTCTGTCTTAGTTATCATGATATCTTATGGTT ATATCATTGCCACCATTCTGAAGATCACCTCAGCTGAAGGCAGAGCCAAATCTTTCAACA CTTGTGCTTCTCACCTTACAGCAGTGATCCTTTTCTTTGGCTCAGGTATCTTTGTTTATA TGTATCCTAATGCTGGTGATTCCCTGAGCCAAAACAAGTTGGCATCAGTCTTATACACAG TTACAATCCCCATGTTAAATCCAGTGATCTACAGCCTGAGGAACAAGGAAATCAAAGATG CTCTAAACAGATGGAAGAAGAGAATCTTCTCCTGGTGTTATGGAATG |
| Conceptual translation |
MTGERNSTRITKFILLGFSEFPKNPIFLFSIFLGIYLLTVSWNINLITLIR/DSHLHTP MYFFLSNLSFLDICYVSTIAPKMLSDFFKKHKFISFMGCSMQYFFFSSLGLTECCLLAAM AYDRYAAICNPLLYRAIMFPTLCVQMVAGSCITGFLGSFIQLCALLQLHFCGPNVINHFF CDLPQLLILSCSDTFFFQVMTSVLTVIFGLTSVLVIMISYGYIIATILKITSAEGRAKSF NTCASHLTAVILFFGSGIFVYMYPNAGDSLSQNKLASVLYTVTIPMLNPVIYSLRNKEIK DALNRWKKRIFSWCYGM Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 59,077,858 | 59,077,857 | rescued_Ins(1) | -/G | rs36041481 (DbSNP) | |
| 11 | 59,077,475 | 59,077,475 | SNP | A/G | rs72472139 (DbSNP) | |
| 11 | 59,077,929 | 59,077,929 | SNP | A/T | rs11229917 (DbSNP) | |
| 11 | 59,310,002 | 59,310,002 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 11 | 59,310,039 | 59,310,039 | SNP | T/A | 1000GP (CEU) | |
| 11 | 59,310,410 | 59,310,410 | SNP | C/T | 1000GP (CEU) | |
| 11 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 215 (Hasin) | |||
| 11 | 59,075,115 | 59,078,161 | CopyNumber | #126 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.