OR5AW1P Olfactory Receptor
| Gene Symbol | OR5AW1P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | AW |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | |
| External Ids | HGNC: 15406 GeneBank: NG_004158 |
| Build #39 labels | OR5AW1P |
| Chromosomal location | X:131,341,529-131,342,452 (-) |
| Cluster | X@131a |
| Synteny | CLIC#48 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5I1 | 40.55% | 291 |
| OR5L2 | 42.67% | 300 |
| OR8U1 | 42.12% | 292 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR5BP1P | 56% | 311 |
| Mouse | Or8u8 | 46% | 292 |
| Rat | Or8u8 | 46% | 292 |
| Cow | OR5BP2P | 54% | 292 |
| Orang | OR5AW2P | 63% | 255 |
| Horse | OR8U8 | 44% | 294 |
| Chimp | OR8U8 | 44% | 291 |
Sequence information
| Nucleotide sequence |
ATGTGTCTCACCATTGTGATGCATTGTGAATTCTTCCTCATGGACTTGACTGATGATCCT CAGCTTCATCCCACCTTCTCTGCCCTCTTCCTCCCCATCTATGTAGTCATGGTGATGGAA ACCTGGGCCTCCTTGCCTTCATTGTGGTCAGTCCCCAATTCCTCACCCCCATGTATTTCT TCCTCAGCAACTGGTCCTCTGTTGACTTCTGTTATTCTTCAGTAACAGTCCCAAAAATAT CAATGGGGTTCTTTTCTGACTGCCAAGTCTTCTCCTTCTCTGGTTGCATGGCCCAGTTAA GCTGCTTTTAAAATATTTGCTGACACCGAGTTCTTCCTCCTGGCCTCCATGGTCTATTAC CGCTAAGAGGCCGTCTGCAATCCTCTGCTCTACCATATCACCATGTCCCCAAAGCTCTGC TTGCAGCTGGTGGCCACCAGCTATGAACATGGTGCTCCCTAGTAGCACAATCTTTCATCT GATCTTCTGTAAGTCTGTGCCATCATTCATTAATTCTGTTATTTCCTCCCCCACCGAGGC TTTAAAAACTCTCCTGCTCTGACATGCAAGGCCTTCAACTTCTTACCTTTGCCTCTAGTA GCTTTAATGTATCGGTGTCCCGGACAATCTTCCTTGTCTCCATTTAATTATGAGAATGCC CTCGGTTTGAGGCAAACACTTGTGCTTCCCACCTGACAGCAGTCAGCCTGTGCTATGGAA CCACAGTGTTCCTTCACCTGCACCTATCCTTGAAGTGTTCACCAGACAGAGATATGCTGG TCTCTGTTTTACACAGTGGCTATTCTCATGCTCAACCCCATGGTCCAAAGTCTGAGGAAC AAGGATGTGAAGAAAACATTTGGGACTTCCTCATGAAGGTTTACAATTCCTCTCCTTCCC CACGCCCAGGTCCCCACGCTGTCC |
| Conceptual translation |
MCLTIVMHCEFFLMDLTDDPQLHPTFSALFLPIYVVMV/GNLGLLAFIVVSPQFLTPMY FFLSNWSSVDFCYSSVTVPKISMGFFSDCQVFSFSGCMAQLSCFX\ADTEFFLLASMV YYRXAVCNPLLYHITMSPKLCLQLVATSYEHGAPXHNLSSDLLXCAIIHXCY/PP PPRLXLSCSDMQGLQLLTFASSSFNVSVSRTIFLVSIXXCPRFEANTCASHLTAVSL CYGTTVFLHLHLSLKCSPDRDML\LFYTVAILMLNPMVQSLRNKDVKKTFGTSSXFTI PLLPHAQVPTLS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| X | 130,475,763 | 130,475,763 | SNP | C/T | rs7879900 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 143 (Hasin) | |||
| X | 130,473,503 | 130,476,526 | Deletion | #321 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.