OR5B10P Olfactory Receptor
| Gene Symbol | OR5B10P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | B |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-235, OR13-34, OR13-64, OR13-67, HsOR11.12.16P, ORL3680 |
| External Ids | HGNC: 8320 GeneBank: BK004763, NG_002306, U86221, U86223 ORDB: ORL3680 |
| Build #39 labels | OR5B10P, OR5B18P |
| Chromosomal location | 11:58,348,988-58,349,628 (-) |
| Cluster | 11@58 |
| Synteny | CLIC#27 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5B2 | 76.19% | 210 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR5B2 | 74% | 210 |
| Mouse | Or5b3 | 68% | 206 |
| Rat | Or5b106 | 66% | 211 |
| Cow | OR5B2 | 72% | 210 |
| Orang | OR5B135P | 94% | 211 |
| Orang | OR5B153P | 93% | 211 |
| Horse | OR5B2 | 75% | 210 |
| Chimp | OR5B3 | 70% | 210 |
Sequence information
| Nucleotide sequence |
TACTTAACTGTCACTCCCAGGGTCACGGCTAGCAGGGCTAGGTTACTTAGAGGGTAGGAG GCTAAGTTCCTCGTACAATGCTTGTGCTGCTCAGATGTTCTTTTTTGTAGCCTTGGCCAC AGTGGAAAATATCGCTGTTGACATCAATGGCCTATGACCACTATATAGCAGTGTGCAAAC CCCTACACTACACTACCACCACGATAGCCAGTGTATGTGCTCATCTGGTCATAGGCTCCT ATGTCTGTGGCTTTCTAAATGCCTCCCTCCGCATTGGGGACATATTCAGTCTCTCTTTCT GTAAGTCCAATCTTGTCCATCACCTTTTCTGTGATGTTCCACCAGTCATGGCTGTGTCTT GCTCTGGTAAACACATTAGCAAGAAGATTCTGGTTTTTATGTCAAGCTTCAATGTCTTTT TGGCTCTTCTAGTTATCTTGACCTCCTACCTGTTCATATTCATCACCATCTTGAAGATGC ACTCAGCTCAGGGACACTTAAAAGCTTTGTCCACCTGTGCCTCTCACCTCATTGCAGTCT CCATCTTCTATGGAACTACTATCTTTATGCACTTACAGCCTAGCTCCAGCCATTCCATGG ACACAGATGAAATGGCATCCTTGTTCTATGCTGTGTTCATC |
| Conceptual translation |
YLTVTPRVTASR\GYLEGRRLSSSYNACAAQMFFFVALATVENI\LTSMAYDHYIAVC KPLHYTTTTIASVCAHLVIGSYVCGFLNASLRIGDIFSLSFCKSNLVHHLFCDVPPVMAV SCSGKHISKKILVFMSSFNVFLALLVILTSYLFIFITILKMHSAQGHLKALSTCASHLIA VSIFYGTTIFMHLQPSSSHSMDTDEMASLFYAVFI Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI) | |
| 11 | 58,116,532 | 58,116,532 | SNP | G/A | rs1938637 (DbSNP) | |
| 11 | 58,116,570 | 58,116,570 | SNP | A/G | rs73484175 (DbSNP) | |
| 11 | 58,349,059 | 58,349,059 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 58,349,314 | 58,349,314 | SNP | C/A | 1000GP (CHBJPT) | |
| 11 | 58,349,359 | 58,349,359 | SNP | G/A | 1000GP (CEU, CHBJPT) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 126 (Hasin) | |||
| 11 | 58,114,461 | 58,117,201 | CopyNumber | #75 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.