OR5BH1P Olfactory Receptor
| Gene Symbol | OR5BH1P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | BH |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsORX.1.3P, ORL4079 |
| External Ids | HGNC: 15407 GeneBank: NG_004157 ORDB: ORL4079 |
| Build #39 labels | OR5BH1P, OR5BH2P |
| Chromosomal location | X:131,398,049-131,398,957 (-) |
| Cluster | X@131a |
| Synteny | CLIC#48 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5F1 | 46.64% | 298 |
| OR5F2P | 46.15% | 299 |
| OR5G1P | 49.67% | 300 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR5BH3 | 76% | 303 |
| Mouse | Or5bh3 | 74% | 300 |
| Rat | Or5bh3 | 74% | 300 |
| Cow | OR5BH4P | 67% | 302 |
| Orang | OR5G1 | 50% | 298 |
| Horse | OR5BH5 | 76% | 303 |
| Chimp | OR5G1 | 50% | 300 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BE152503 |
Sequence information
| Nucleotide sequence |
ATGGTGACTGACTTCATCTTTCTCGGCATGACAGATAACTCTCAGCTTGAAGTCCTGCTA TTTGGAGTCTTTCTTATTGCTTACATCATCACTGTGTTGGAGAATCTAGGCCTTGTGGTT CTGATCAGAGTCAGCTCCCGCCTCCACACCCCATGTACTTTTTCCTCTCTAATCAGTCCT TCCTTGATGTCTGTTTCTCTTCCATTACAATTCCACAGAATTTAGCACATTTGTTTTCTA AGCTGCAGTATGTTTCTTTCCTTTTCCCGTATAACTTAAATGAGCTTGTTTGTAATCTTT GCCTCTGCTGAATGCAATTTTTTAAACTTGCATGGCCTATGACCGCTTTACTGCCATCTG TCACCCACTGTTCTACCACATTACCATGTCAAGAGGCCATTATCTTTTCTTGGTAGCAGG ATGCTACCTTGGTGGGTTAGTTAAGATGGTCACTGTGACAACTTCCATCACACAACTATC GCTTTGTCAACCATGTGTCCTCCCTGCCTTCTTCTGTGACATTCCCTCATTGTTGGTACT GGTTTGCTCAGATCCTTGGATCACCTCCCGATCTTGGTGGTTGGCTGTGGGGGATTCACC CTGGTCACCTCTGTTGTGGTGATCCTTGTCTCCTACATGTCTTCCCTCATGACTATCCTA GGAATTCCCTTAGCTTCTGGAAAACAGAGAGCCTTCTCCACCTGTGCCTCCCACTTGACT GCTGTTAGCCTGTACTATGAAACAACTATGTACACTTACTTGCCCGCCTCGCGACATGGA TCCGGGGCAGGAAATCAGATTGTGTCAGTATTTTATACAATGGTGATCCCCATGTTAAAT CCTCTCATCTATAGTTTGAGAAATGAGGAAGTGAAAGTTGCCCTATGAAAAACATTGAGA CATAGTCCT |
| Conceptual translation |
MVTDFIFLGMTDNSQLEVLLFGVFLIAYIITVLENLGLVVLIRVSSRLH/PMYFFLSNQ SFLDVCFSSITIPQNLAHLFSKLQYVSFL\RITXSLFVIFASAECNFL\CMAYDRFT AICHPLFYHITMSRGHYLFLVAGCYLGGLVKMVTVTTSITQLSLCQPCVLPAFFCDIPSL LVLVCSD/LDHLPILVVGCGGFTLVTSVVVILVSYMSSLMTILGIPLASGKQRAFSTCA SHLTAVSLYYETTMYTYLPASRHGSGAGNQIVSVFYTMVIPMLNPLIYSLRNEEVKVALXbr/>KTLRHSP Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| X | 130,532,111 | 130,532,111 | SNP | A/G | rs2503369 (DbSNP) | |
| X | 130,532,236 | 130,532,236 | SNP | C/G | rs2503370 (DbSNP) | |
| X | 130,532,530 | 130,532,530 | SNP | C/T | rs2475424 (DbSNP) | |
| X | 130,532,704 | 130,532,704 | SNP | G/T | rs2475425 (DbSNP) | |
| X | 130,532,824 | 130,532,824 | SNP | C/T | rs17000490 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 144 (Hasin) | |||
| X | 130,530,023 | 130,533,031 | Deletion | #318 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.