OR5BL1P Olfactory Receptor
| Gene Symbol | OR5BL1P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | BL |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | ORL3550 |
| External Ids | HGNC: 15275 GeneBank: NG_004200 ORDB: ORL3550 |
| Build #39 labels | OR5BL1P |
| Chromosomal location | 11:58,171,089-58,171,721 (+) |
| Cluster | 11@58 |
| Synteny | CLIC#27 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5AU1 | 33.82% | 207 |
| OR9Q1 | 36.62% | 213 |
| OR9Q2 | 36.92% | 195 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BI772562 |
| mRNA | BC110819 |
Sequence information
| Nucleotide sequence |
ATTTGACTGAAATTGATCTTTGGAAATCCTAGATAGTAATAGATTTTCAGATGTGTCTAT GATTATTTTGTGGGACTGTCAACCCTTGCTTTATGACACCATCACAACTCTCAAGATGTC TGGCAGAAGCTGGTGACTGCATATTGTAGAGGGTTTGACAAATGTAATCCAATGTATACA CTTCACCTGCTCACTCTCCTTTTGTGCCTTCATCTATAGGTTTCACTCTCTGTGACCTCC ATTGCTGCTGACCCTGAATTGGGTGATAGCTTCCTCCAGCAGCTGCTGATTTTTCACTTT GCTCTGTATATGATTCTGACCAGACTAGTTTTGATCCTGTTCTCTGACTTGTTCATCAGC AAGGCCATCTAAACACCTGCAAATCAGGTCTCTAGGCAAAGATTCCTCAACCTTTTTCTA CCTTTGCCTCATGCAGAACTGCAGTTCGGTTGATTGTTGAGACTACAGCTTTGATCTATG TGTGCAGCAGTAGGCAAGTCCCTTACAGGGGAGAGGGCCGTGACCATGTTTTAGACTGTA GTGAACACCAGGCTGACCATTCCAATTTTATAGCCTGAGGAAAAAAAGGCAAAGGAGGCC CTGAGGAAAGGTCTTAATAAAGCCAAGTTGTTC |
| Conceptual translation |
IXKLIFGNPRXXFRCVYDYFV//CQPLLYDTITTLKM/WQKLVTAY\EGLTNV IQCIHFTCSLSFCAFIYRFHSLXPLLLTL/LGDSFLQQLLIFHFALYMILTRLVLILF SDLFISKAIXPANQVSRQRFLNL/STFASCRTAVRLIVETTALIYVCSS\KSLTGER AVTMFXVVNTRLTIPILXEEKKAKEALRKGLNKAKLF Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 57,939,147 | 57,939,147 | Del(1) | -/A | rs58347336 (DbSNP) | |
| 11 | 57,938,891 | 57,938,891 | SNP | C/T | rs10750888 (DbSNP) | |
| 11 | 58,171,089 | 58,171,089 | SNP | A/T | 1000GP (CEU, CHBJPT) | |
| 11 | 58,171,161 | 58,171,161 | SNP | G/C | 1000GP (CEU) | |
| 11 | 58,171,419 | 58,171,419 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 11 | 58,171,680 | 58,171,680 | SNP | A/G | 1000GP (CEU) | |
| 11 | 100 | -100 | SNP | A/T | 1000GP (YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 57,912,509 | 57,948,750 | CopyNumber | Variation_4745 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.