OR5BN1P Olfactory Receptor
| Gene Symbol | OR5BN1P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | BN |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-161, ORL3579 |
| External Ids | HGNC: 15276 GeneBank: BK004605, NG_004199 ORDB: ORL3579 |
| Build #39 labels | OR5BN1P |
| Chromosomal location | 11:56,132,666-56,133,494 (-) |
| Cluster | 11@56 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR8U1 | 63.16% | 154 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Sequence information
| Nucleotide sequence |
GGAAACATTTTTACATTTATCCACATAGGTGTCTTAATTTTCCTAAAGAAACATCCCCAC TCTCCAGAGGTGCCAAATAAATATTTATTGAAATCCATGTCATGATGAATTTTCTGCCTG CCAAAAATAATCATTACTTTATTGCAGTAGGAGTGGGATGCTTTAAATTTAGAGACACGG GTTTTTCTGGAAGAGGACTTCCCATGTGGATTCAGCTTGTGGATTGTACGTCAATTGTCT TTTTTCTTGGAAATAAATTAATTTGCTCATTTAAAAAAATGATGCAGGAAGCATACGAGT ACTTTTTCTCTGAGCAACTTGGCTTTTTAAGTTTCTGTTATGCTTCAGTCATTACATCCA AAATGTTTGGAAGTTTCTTGTACAAACAAAAAAAATTAACCTTCAATGCACATAGGCTGC TCTCTCACCTTCATGACCACCGAGTGCTTGCTCTAGCTTTCATGGCCTGTGATCAATACC TGGTCATTTGTAATCCTCCTTTGTATATGGTCACCATGTCCCCCCCGCAAGGAGTCTGCA TTCAGCTTATGCCTGCCTCCTATAGCTATAGCTTCCTGATGACACTTTCACATTATCCTC AGCCTTTGTCTCCCTTATTGCCCCTCTGTATCATTGATGTTCAATGGAAGCCTGTTCCTT ATGTACTTAATGCTCAGAAAATTCTCTTGACACAGACAGGATGGCCTCTGTCTTCTACAC AGTAGTCATTCCCATGTTGAGCCCTTTGATCTGGAGCCTCAGGAACAAGGATGTGAAAGA TGCCCTGAGGAAAGTCATTGTCAACAGAAACCAGGCATTATTTTGTTCA |
| Conceptual translation |
GNIFTFIHIGVLIFLKKHPHSPEVPNKYLLKSXVMMNFLPAKNNHYFIAVGVGCFKFRD TGFSGRGLPMWIQLVDCTSIVFFLGNKLICSFKKMMQEAYEYFFS\NLAFXDFCYASV ITSKMFGSFLYKQKKLTFNA\GCSLTFMTTECL/LAFMACDQYLVICNPPLYMVTMSP PQGVCIQLMPASYSYSFLMTLSHY/SAF/LPYCPSVSLMFNGSLFLMYLM\ENSLDT DRMASVFYTVVIPMLSPLIWSLRNKDVKDALRKVIVNRNQALFCS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI) | |
| 11 | 55,900,230 | 55,900,230 | SNP | C/T | rs2460203 (DbSNP) | |
| 11 | 55,900,444 | 55,900,444 | SNP | C/G | rs2512790 (DbSNP) | |
| 11 | 55,900,447 | 55,900,447 | SNP | A/G | rs7124196 (DbSNP) | |
| 11 | 55,900,452 | 55,900,451 | Ins(1) | -/G | rs61131111 (DbSNP) | |
| 11 | 55,900,462 | 55,900,462 | SNP | C/T | rs7125117 (DbSNP) | |
| 11 | 55,900,463 | 55,900,463 | SNP | A/C | rs7110376 (DbSNP) | |
| 11 | 55,900,477 | 55,900,477 | SNP | A/G | rs1482000 (DbSNP) | |
| 11 | 55,900,721 | 55,900,721 | SNP | C/T | rs1482001 (DbSNP) | |
| 11 | 55,900,913 | 55,900,912 | Ins(1) | -/G | rs35239260 (DbSNP) | |
| 11 | 56,132,754 | 56,132,754 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 11 | 56,132,968 | 56,132,968 | SNP | C/G | 1000GP (CEU) | |
| 11 | 56,132,971 | 56,132,971 | SNP | G/A | 1000GP (CEU) | |
| 11 | 56,132,986 | 56,132,986 | SNP | C/T | 1000GP (CEU) | |
| 11 | 56,132,987 | 56,132,987 | SNP | A/C | 1000GP (CEU) | |
| 11 | 56,133,001 | 56,133,001 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 11 | 56,133,245 | 56,133,245 | SNP | C/T | 1000GP (CEU, CHBJPT) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 171 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.