OR5BN2P Olfactory Receptor
| Gene Symbol | OR5BN2P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | BN |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | |
| External Ids | HGNC: 29194 |
| Build #39 labels | |
| Chromosomal location | 11:56,116,639-56,117,256 (-) |
| Cluster | 11@56 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5BN1P | 82.43% | 74 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Sequence information
| Nucleotide sequence |
TTAGTGCTTTGTTCTAATGTTTTGTATCACTTTATTTTAGTAAAAATTGAGTAAGCAAAA AATATACTGGGTTCTGACTATCTTTGGCTTTTTAGAGGCATTCATTGCCATGAATAAATT ATAAAAGTTATATAGTTCTCTAATATGTTTATATTTTATAATATGAATATTTAGTTCTCT AATATGTTTATATTTTATAATATGAATATTTCTGTACATTATTTCCTAAAATGTATTTTT TTCTTTTGTATCTGTTGTCTTTAGCTATTAATTTTTGATAGTTTTTCTACCCATCCTCCT CTTCCCCTACTTTAAGAGGCAGATATCTGTGCAAATTCCTAGCCATGCTACACTAATACT ACAGCTTCCTGATGACACTTTTACATTATCCTCAACTTTTGCCTCTCTTATTGACCCTCT GTATCATCGATGCTCTATGGAAGACTGTTCCTTATGTACTTAATGCTCAGAAAATTCTCT TGACACAGACAGGATGGCCTCTGTCTTCTACACAGTAGTCATTCCCATGTTAAACCCATT GATCTGGAGCCCCAGGAACAAGGATGTGACATTGCCCTGAGGAAAGTCATGGTCAATAGA AAACAGGCATTATTTTGC |
| Conceptual translation |
LVLCSNVLY\LFXKLSKQKIYWVLTIFGFLEAFIAMNKLXLYSSLICLYFIIXFSS LICLYFIIXFLYIISXVFFSFVSVVFSYXLIVFLPILLFPYFKRQISVQIPSHATLI LQ/SXHFYIILNFCLSYXSVSSMLYGRLFLMYLM\ENSLDTDRMASVFYTVVIPML NPLIWSPRNKDVT/ALRKVMVNRKQALFC Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI) | |
| 11 | 55,884,294 | 55,884,294 | SNP | A/C | rs17603331 (DbSNP) | |
| 11 | 55,884,371 | 55,884,371 | SNP | A/G | rs7123005 (DbSNP) | |
| 11 | 55,884,434 | 55,884,434 | SNP | A/G | rs7123036 (DbSNP) | |
| 11 | 55,884,497 | 55,884,497 | Del(1) | -/A | rs11364570 (DbSNP) | |
| 11 | 55,884,574 | 55,884,574 | SNP | A/C | rs1482008 (DbSNP) | |
| 11 | 55,884,690 | 55,884,690 | SNP | G/T | rs1482009 (DbSNP) | |
| 11 | 56,116,818 | 56,116,818 | SNP | C/A | 1000GP (CEU) | |
| 11 | 56,116,881 | 56,116,881 | SNP | G/A | 1000GP (CHBJPT) | |
| 11 | 56,116,895 | 56,116,895 | SNP | G/A | 1000GP (CEU) | |
| 11 | 56,116,958 | 56,116,958 | SNP | G/A | 1000GP (CEU) | |
| 11 | 56,117,214 | 56,117,214 | SNP | T/G | 1000GP (CEU, CHBJPT) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.