OR5BR1P Olfactory Receptor
| Gene Symbol | OR5BR1P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | BR |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-243, HsOR11.13.2P, ORL3623 |
| External Ids | HGNC: 15279 GeneBank: BK004789, NG_004196 ORDB: ORL3623 |
| Build #39 labels | OR5BR1P |
| Chromosomal location | 11:59,332,756-59,334,085 (-) |
| Cluster | 11@59a |
| Synteny | CLIC#27 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5AN2P | 76.32% | 228 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Sequence information
| Nucleotide sequence |
ATGACTGTGGAAAGGAGTAGCATGACAATTACAAAGTTCATTCTCTTGGGATTCTCTGAA TATTCAAAGACCACTATTTTTCTCTTTTCAGTATTCCTAGGGATATACCTCCTGACCATG TCCTGAAACGTGAGTCTCATCGCCCTTATCAGGACGGACTCCCATCTACATGCACCTGTG TACTTTTTCCTTAGTAATCCGTCTTTTCTGGACATCTGCTGTGTTTCCACTATAGCCCCC AAGATGCCCTCAGACTTTTTCAAGAAGCATAAATTCATTTCCTTTATGGGGTGCACCATG CAGTACTTCTCTAGCCTGAATGTGACTGAGTGCTGTCTTCTTACAGCCATGGCTTATGAT TAATATGCTGCCATTTGTGATCCTCTGCTCTACACAGCCATCATGTCACCTGCTCTCTGT ATGCCAATGGTGGCAGGATCTTGTACAACTGGATACTTTGTCTCATTTATCCAACTCTGT GCCTTGCTTCTGCTCCATTTCTGTGAGTCAAATAGCAGCCATTTCTTTTGTGACCTGCCC CAACTGCTGATTCTATCCTGTTCTCATACTGTTTTTTTTTTCTCAAGTCATGACCACTAT GCTCACAGTAACCTTTATACTCACCTCTATCTTGGTTATCATGATAACTTATGGTTATAT CATTGCCAACATTCATCTCTTTTATGGGATGCACCATGTAATACTTCTTCTCTAGCCTGG GTCTGACTGAGTGCTGTCTTCTGGAAGCTATGGCTTATAATTGATATGCTGCCATTTGTG ACCCTCTGCTCTACATGGCCATCCATGTCCCCAACCTCTGTGTGCACATAATGGTTGGAA CCTGTATAACTATTATCTTTGGCTCATTTATCCAACTATGTGCTTTGCTTCAGCTCCATT TCTGTGGGCCAAATAGCAACCATTTCTTCTGTGACCTGCCCCAACTCTTGATCCTATCTT GCTATGACACCTTTTTCTGTCAAGTCATGACATCCATGCTTACAGTGGTATTTGGACTCA CATCTGTCTTAGTTATCATGATATTTTATGGCTATGTCATTGCTACCATTCTGAAGATCA TCTCAGTTGAAGGCAGGTCTAAGGTCTTCAACACTGGTGGTTCTCCCTGATAGCAGTGAC TCTCTTCTATTGCTCAAGAATCTTTGTCTATATGTGCTCTCACTCTGATGCTTCTCTGAG TAGAAACAAGGTGGATTCTATTGTATACACTGTGGTGATCCCCAGGTTGAATCCATTGAT CTACAGCCTGAGTGACAAGTAAATCAAAGATGCCCTAAAGAGATGGACGAAGAGAATATT CTCCTGGCCT |
| Conceptual translation |
MTVERSSMTITKFILLGFSEYSKTTIFLFSVFLGIYLLTMSXVSLIALIRTDSHLHAPV YFFLSNPSFLDICCVSTIAPKMPSDFFKKHKFISFMGCTMQYFSSLNVTECCLLTAMAYD XAAICDPLLYTAIMSPALCMPMVAGSCTTGYFVSFIQLCALLLLHFCESNSSHFFCDLP QLLILSCSHTVFF\QVMTTMLTVTFILTSILVIMITYGYIIANI\SFMGCTMXFFSS LGLTECCLLEAMAYNXAAICDPLLYMAIHVP/PLCAHNGWNLYNYYLWLIYPT\ALL QLHFCGPNSNHFFCDLPQLLILSCYDTFFCQVMTSMLTVVFGLTSVLVIMIFYGYVIATI LKIISVEGRSKVFNTGGS/LIAVTLFYCSRIFVYMCSHSDASLSRNKVDSIVYTVVIPR LNPLIYSLSDKXKDALKRWTKRIFSWP Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 59,100,989 | 59,100,988 | Ins(1) | -/A | rs67867838 (DbSNP) | |
| 11 | 59,100,979 | 59,100,978 | Ins(1) | -/A | rs72347079 (DbSNP) | |
| 11 | 59,100,978 | 59,100,977 | Ins(1) | -/A | rs34645371 (DbSNP) | |
| 11 | 59,100,988 | 59,100,987 | Ins(1) | -/A | rs71036514 (DbSNP) | |
| 11 | 59,100,987 | 59,100,986 | Ins(1) | -/A | rs72075856 (DbSNP) | |
| 11 | 59,100,620 | 59,100,620 | SNP | A/G | rs7107591 (DbSNP) | |
| 11 | 59,101,303 | 59,101,303 | SNP | A/G | rs73478779 (DbSNP) | |
| 11 | 59,101,176 | 59,101,176 | SNP | A/G | rs10896962 (DbSNP) | |
| 11 | 59,101,144 | 59,101,144 | SNP | C/G | rs72921150 (DbSNP) | |
| 11 | 59,101,269 | 59,101,269 | SNP | C/G | rs56841674 (DbSNP) | |
| 11 | 59,100,666 | 59,100,666 | SNP | C/T | rs11229922 (DbSNP) | |
| 11 | 59,332,822 | 59,332,822 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 59,333,147 | 59,333,147 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 59,333,671 | 59,333,671 | SNP | G/C | 1000GP (CEU) | |
| 11 | 59,333,703 | 59,333,703 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 59,333,854 | 59,333,854 | SNP | T/C | 1000GP (CEU) | |
| 11 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 103 (Hasin) | |||
| 11 | 59,098,229 | 59,101,658 | CopyNumber | #147 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.