OR5G1P Olfactory Receptor
| Gene Symbol | OR5G1P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | G |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-104, OR11-218, OR11-211, OR93, OR93Hum, HsOR11.11.91P, ORL3113 |
| External Ids | HGNC: 8344 GeneBank: AB065499, AF045576, AF399369, BK004646, BK004764 ORDB: ORL3113 |
| Build #39 labels | OR5G1P |
| Chromosomal location | 11:56,775,265-56,776,206 (-) |
| Cluster | 11@56 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5G3P | 63.02% | 311 |
| OR5G4P | 69.46% | 298 |
| OR5G5P | 63.34% | 311 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR5G1 | 87% | 314 |
| Mouse | Or5g9 | 78% | 310 |
| Rat | Or5g9 | 78% | 310 |
| Cow | OR5G1BP | 78% | 312 |
| Orang | OR5G1 | 93% | 314 |
| Horse | OR5G1 | 83% | 316 |
| Chimp | OR5G1 | 97% | 314 |
| Chimp | OR5G1CP | 96% | 313 |
Expression evidences
| Source | Accession |
|---|---|
| mRNA | AB529232 |
Sequence information
| Nucleotide sequence |
ATGGCTAATGAAAACTACACAAAGGTCACCTAATTCATTTTCACAGGCTTGAATTACAAT CCTCAGTTGCAGGTCTTCCTTTTCCTACTCTTTCTGACAACTTTCTATGTCATCAATGTA ACTGGAAACTTGGGAATGATTGTCCTCATCCGAATTGATTCCCGCCTTCACACACCCATG TACTTTTTCCTCAGCCACCTGTCCTTTGTGGACACCTGCTTCTCCTCAGTTGTGAGCCCC AAGATGCTCACTGACTTCTTTGTGAAGAGGAAAGCCATTTCTTTCCTTGGCTGTGCTTTG CAGCAGTGGTTCTTTGGGTTCTTTGTGGCAGCAGACTGTTTCCTCTTGGAGTCCATGGCC TATGACTGCTATGTGGCCATCTGTAACCCATTGTTATACTCAGTTGCTATGTCCCAGAGG CTCTGCATCCAGCTAGTGGTGGGTCCCTATGTCATTGGACTCATGAATACCATGACTCAC ACAACAAATGCATTTTGTCTCCCTTTTTGTGGCCCTAATGTCATCAATCCTTTCTTCTGT GATATGTCCCCCTTACTTTCCCTTGTATGTGCTGATACCAGGCTCAATAAGTTGGCAGTT TTCATCGTGGCTGGAGCTGTGGGAGTCTTCAGTGGTCTGACTATCCTGATTTCCTACATT TACATCCTCATGGCCATCCTGAGGATCCGCTCTGCTGATGGGAGGTGCAAAACCTTTTCT ACTTGCTCTTCTCACCTGACAGCTGTTTTCATCTCGTATGGTACCCTTTTCTTTATTTAT GTACATCCCAGTGCAACCTTCTCCCTGGATCTCAATAAAGTAGTGTCTGTGTTTTACACA GCAGTGATTCCTATGTTGAACCCACTTATCTACAGCTTGAGAAACAAGGAAGTCAAAGAT GCCATCCACAGGACTGTCACTCAGAGGAAGTTTTGCAAGGCC |
| Conceptual translation |
MANENYTKVTXIFTGLNYNPQLQVFLFLLFLTTFYVINVTGNLGMIVLIRIDSRLHTPM YFFLSHLSFVDTCFSSVVSPKMLTDFFVKRKAISFLGCALQQWFFGFFVAADCFLLESMA YDCYVAICNPLLYSVAMSQRLCIQLVVGPYVIGLMNTMTHTTNAFCLPFCGPNVINPFFC DMSPLLSLVCADTRLNKLAVFIVAGAVGVFSGLTILISYIYILMAILRIRSADGRCKTFS TCSSHLTAVFISYGTLFFIYVHPSATFSLDLNKVVSVFYTAVIPMLNPLIYSLRNKEVKD AIHRTVTQRKFCKA Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 56,543,175 | 56,543,175 | Del(1) | -/A | rs34410062 (DbSNP) | |
| 11 | 56,543,499 | 56,543,499 | SNP | A/C | rs56139492 (DbSNP) | |
| 11 | 56,542,781 | 56,542,781 | SNP | A/G | rs534606 (DbSNP) | |
| 11 | 56,542,818 | 56,542,818 | SNP | A/G | rs1943638 (DbSNP) | |
| 11 | 56,542,928 | 56,542,928 | SNP | A/G | rs1943639 (DbSNP) | |
| 11 | 56,543,538 | 56,543,538 | SNP | A/G | rs73478426 (DbSNP) | |
| 11 | 56,542,759 | 56,542,759 | SNP | C/T | rs55688907 (DbSNP) | |
| 11 | 56,542,757 | 56,542,757 | SNP | C/T | rs1943637 (DbSNP) | |
| 11 | 56,543,612 | 56,543,612 | SNP | C/T | rs12416731 (DbSNP) | |
| 11 | 56,775,281 | 56,775,281 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 11 | 56,775,305 | 56,775,305 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 56,775,342 | 56,775,342 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 56,775,452 | 56,775,452 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 56,776,055 | 56,776,055 | SNP | C/T | 1000GP (CEU) | |
| 11 | 56,776,136 | 56,776,136 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 11 | 56,775,284 | 56,775,284 | SNP | T/A | 1000GP (CHBJPT) | |
| 11 | 56,775,990 | 56,775,990 | SNP | A/G | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.