OR5M14P Olfactory Receptor
| Gene Symbol | OR5M14P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | M |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | ORL3129 |
| External Ids | HGNC: 15057 GeneBank: NG_004263 ORDB: ORL3129 |
| Build #39 labels | OR5M14P, OR5M15P |
| Chromosomal location | 4:41,723,210-41,723,563 (-) |
| Cluster | 4@42 |
| Synteny | CLIC#0 |
| Remarks | Disrupted by Alu repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5M13P | 74.49% | 98 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Rat | Or5m11 | 56% | 104 |
| Orang | OR5P2 | 46% | 113 |
| Horse | OR5E1 | 51% | 104 |
Sequence information
| Nucleotide sequence |
TTCTCTTTTCTTTTCTTTTCTTTAGACCTCATTAGAAGCCAAGCAAATACAATGTCAAAG AAACACTGGACAGCCATAGCTGAGTTTATTCCCCTGGGACCGACAGATCAAGCCGAGTTG CAGCTTGTCCTTTTTTTCTGTCACGTTCCTGGTCATTTACCTTATTATGGTAATGGGCAA TTTGAGCATGATTTTGATCATTAGAAGTGACTGAAAACTTCACATTCCAATGTACTTCTT CCTCAGTCACCTCTCCTTTGCAGTTCTCTGTTATACTCTCAATGTCACTCCTCAGATATT GGTTAATTTCCTATCCAAGAGAAAAACCATTTTCTTCATTGGTTGTGTAAGTTT |
| Conceptual translation |
FSFLFFSLDLIRSQANTMSKKHWTAIAEFIPLGPTDQAELQLVLFF\TFLVIYLIMVMG NLSMILIIRSDXLHIPMYFFLSHLSFAVLCYTLNVTPQILVNFLSKRKTIFFIGCVS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 4 | 41,725,444 | 41,725,444 | Del(1) | -/A | rs35078948 (DbSNP) | |
| 4 | 41,725,450 | 41,725,450 | Del(1) | -/A | rs59423322 (DbSNP) | |
| 4 | 100 | -100 | SNP | T/C | 1000GP (YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 4 | 41,723,227 | 41,725,680 | CopyNumber | #37 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.