OR5M7P Olfactory Receptor
| Gene Symbol | OR5M7P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | M |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-196, OR11-189, HsOR11.11.73P, ORL3510 |
| External Ids | HGNC: 14818 GeneBank: AF399359, AF546644-AF546657, BK004645, BK004655, NG_004149 ORDB: ORL3510 |
| Build #39 labels | OR5M7P |
| Chromosomal location | 11:56,500,299-56,501,270 (-) |
| Cluster | 11@56 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5M6P | 86.22% | 312 |
| OR5M8 | 89.03% | 310 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR5M8 | 86% | 310 |
| Mouse | Or5m8 | 83% | 310 |
| Rat | Or5m8 | 82% | 310 |
| Cow | OR5M8P | 75% | 302 |
| Orang | OR8D4 | 53% | 307 |
| Horse | OR5M8 | 84% | 310 |
| Chimp | OR5M8 | 89% | 310 |
| Chimp | OR5M6 | 87% | 312 |
Sequence information
| Nucleotide sequence |
ATGAGAAGGAACTTCACGTTGGTGACTGAGTTCATTCTCCTGGGACTGACGAATCACCAG GAATTACAGATTCTCCTCTTCATGCTGTTTCTGGCCATTTACATGGTCACAGTGGCAGGG AATCTTAGCATGATTGCCCTCATCCAGGCCAATGCCCGGCTCCACACGCCCATGTACTTT TTCCTGAGCCACTTATCCTTCCTGGATCTGTGCTTCTCTTCCAATGTGACCCCAAAGATG CTGGAGATTTTCCTTTCAGAGAAGAAAAGCATTTCCTATCCTGCCTGTCTTGTTCAGTGT TACCTTTATATCATCTTGGTACACGTTGAGATCTACATCCTGGCTGTGATGGCCTTTGAC TAGTACATGGCCATCTGAAACCCTCTGCTTTATGGCAGCAAAATGTCCAAAAGTGTGTGT TCCTTCCTCATCACGGTGCCTTATGTGTATGGAGCGCTCACTGGCCTGATGGAGACCATG TGGACCTACAACCTAGCCTTCTGTGGCCCCAACGAAATTAATCACTTCTACTGTGCAGAC CCACCACTGATTAAGCTGGCTTGTTCTGACACCTACAACAAGGAGTTGTCAATGTTTGTT GTGGCTGGCTGGAATCTTTCGTTTTCTCTCTTCATCATATTTATTTCCTACTTTTACATT TTTCCTGCTATCTTAAGGATTCGCTCTACAGAGGGCAGGCAAAAAGCTTTTTCTACCTGT GGCTCCCATCTGACAGCTGTTACTATTTTCTATGCAACTCTGTTCTTCATGTGTCTCAGA CCTCCATCAGAAGAGTCCATGGAGCAAGGACAAATGGTAGCTGTACTTTATACCACTGTG ATCCCCATGTTAATCCCATGATCTACAGTCTGAGGAACAAGGATGTGAAAAAGGCTTTAT CCAAAGAACTGTTCAAAAGAAAATTGTTTCCTAAATAAACATCAGTATTGATTTTTGTCA TGCTGTCATTTT |
| Conceptual translation |
MRRNFTLVTEFILLGLTNHQELQILLFMLFLAIYMVTVAGNLSMIALIQANARLHTPMYF FLSHLSFLDLCFSSNVTPKMLEIFLSEKKSISYPACLVQCYLYIILVHVEIYILAVMAFD XMAIXPLLYGSKMSKSVCSFLITVPYVYGALTGLMETMWTYNLAFCGPNEINHFYCAD PPLIKLACSDTYNKELSMFVVAGWNLSFSLFIIFISYFYIFPAILRIRSTEGRQKAFSTC GSHLTAVTIFYATLFFMCLRPPSEESMEQGQMVAVLYTTVIPM/NPMIYSLRNKDVKKA LSKELFKRKLFPK/NIS/XLSCCHF Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 56,268,234 | 56,268,234 | SNP | A/G | rs61902914 (DbSNP) | |
| 11 | 56,268,056 | 56,268,056 | SNP | C/T | rs61902913 (DbSNP) | |
| 11 | 56,267,823 | 56,267,823 | SNP | G/A | rs949359 (DbSNP) | |
| 11 | 56,268,114 | 56,268,114 | SNP | G/A | rs604811 (DbSNP) | |
| 11 | 56,268,433 | 56,268,433 | SNP | G/A | rs627933 (DbSNP) | |
| 11 | 56,267,880 | 56,267,880 | SNP | T/G | rs605762 (DbSNP) | |
| 11 | 56,500,347 | 56,500,347 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 11 | 56,500,580 | 56,500,580 | SNP | C/T | 1000GP (CEU) | |
| 11 | 56,500,638 | 56,500,638 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 56,500,758 | 56,500,758 | SNP | G/A | 1000GP (CEU) | |
| 11 | 56,500,957 | 56,500,957 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 11 | 100 | -100 | SNP | A/G | 1000GP (YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 186 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.