OR6M3P Olfactory Receptor
| Gene Symbol | OR6M3P1 (View this gene in GeneCards) |
| Family | 6 |
| Subfamily | M |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.18.4P, ORL3529 |
| External Ids | HGNC: 14741 GeneBank: NG_004140 ORDB: ORL3529 |
| Build #39 labels | OR6M3P |
| Chromosomal location | 11:123,861,681-123,862,523 (-) |
| Cluster | 11@124 |
| Synteny | CLIC#29 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR6M1 | 54.33% | 289 |
| OR6M2P | 56.79% | 287 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR6M6 | 61% | 289 |
| Cow | OR6M2 | 56% | 289 |
| Orang | OR6M3BP | 84% | 267 |
| Horse | OR6M9 | 65% | 287 |
| Chimp | OR6M2P | 56% | 290 |
Sequence information
| Nucleotide sequence |
ATGGTAACTGAATTCACCCGGTCTCCCTTCCTGCTGTCCAGGAGCTTCAGATTTGGCTAT GTGTCCTTCTCTGGCTGGTTCATATGCTCACCATAACAGGAAACCTTTTCGTCATTTTCT TAACGTGGACAGATAATTGTCTCCAAACCCCAATGGACTTGTTCCTTAGAAAAAAGTCAT ATCGTTCTCTGGCTGCATCACCCAAATATATTTCTACTTCTTTCTAGGGACAGTGGCGTT TATCCCCTTGGCAGTGACATCCTTCAAACACTGCATGGCAACCTGTGACCCCCTGTGCAG CACCATCATTGCAAAAAGCAGGGCCTGCCTCCTGCTGGCTCTGGGATGCTGGATGGGAAC CTTCCTGGCTGTGTTGCGCCTGACTATTGTGGTGTCCAGGTTGCCAGACTGTACTGAAAA AATTAGTCCCTTCTTCTGTGACATTGCCTCTTTACTGCAGGTGGCCTGTATTGATATTCA TTTCATTGAGATGATAAGCTTCCTTTGATCATCTCTTATGGTCCTGACCTCGCTGGTGCT TAATGCCACATCCTACGCCTACATCATTTCTCCCTCCTGTGCATCCCCTCAGCCCAAGGA TGTCAGGAGGCCTTTTCCACCTGTGCTTCACACATCACCATCATCTTTATTGCCTGCCGA AACTCCATCTCCACGTGTGTGAGGCCTAACCCGAGGTATTAGCTGGATTTTGACAAAGTG ACAGCTATCCTCACTATAGTAGTGACTTCTTTTCTGAATCCCCGCATTTATAGCTTGAGG TAAAGGAAGTATGAAGGGAGTCAATTTGCACAATACTGTCACCACATTCCAAAGGAACAT GAC |
| Conceptual translation |
MVTEFT/VSLPAVQELQIWLCVLLWLVHMLTITGNLFVIFLTWTDNCLQTPMXLVPX KVISFSGCITQIYFYFFLGTVAFIPLAVTSFKHCMATCDPLCSTIIAKSRACLLLALGCW MGTFLAVLRLTIVVSRLPDCTEKISPFFCDIASLLQVACIDIHFIEMISFLXSLMVLTS LVLNATSYAYIIS/LLCIPSAQGCQEAFSTCASHITIIFIACRNSISTCVRPNPRYXD FDKVTAILTIVVTSFLNPRIYSLRXKYEGSQFAQYCHHIPKEHD Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
| 11 | 123,732,783 | 123,732,783 | SNP | A/G | rs4570591 (DbSNP) | |
| 11 | 123,733,108 | 123,733,108 | SNP | A/G | rs948159 (DbSNP) | |
| 11 | 123,861,879 | 123,861,879 | SNP | G/A | 1000GP (CEU) | |
| 11 | 123,862,075 | 123,862,075 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 11 | 123,862,400 | 123,862,400 | SNP | G/A | 1000GP (CEU, CHBJPT) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 225 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.