OR6R2P Olfactory Receptor
| Gene Symbol | OR6R2P1 (View this gene in GeneCards) |
| Family | 6 |
| Subfamily | R |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | |
| External Ids | HGNC: 31307 GeneBank: NG_004434 |
| Build #39 labels | |
| Chromosomal location | 8:21,797,086-21,797,896 (+) |
| Cluster | 8@22 |
| Synteny | CLIC#0 |
| Remarks | Disrupted by Alu repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR6R1P | 88.61% | 79 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR6M2B | 48% | 101 |
| Mouse | Or6x1 | 42% | 110 |
| Rat | Or6x1 | 41% | 109 |
| Cow | OR2F1 | 44% | 106 |
| Orang | OR6AR1P | 92% | 113 |
| Horse | OR6R15P | 45% | 163 |
| Chimp | OR2F1 | 44% | 103 |
Sequence information
| Nucleotide sequence |
CCAAATTCCCTATTTGTGAGTTAGCTTTTGCTTAAATGCTTTAGTAAAATAAAATAAAAT ACTTTTTAATTTTAAGAACAAAGACAATTTCTTAAAAATATCTCCAGTGACAGGATCTTG TTTGACTCAGGGGCTGCATTCTACATCACAGATAACGCGGACAATTGAGTGGCCTTTCTT TCTTTTTTTTTCCTTTCTTTGCTTTTTTTTTTTTTTTTTTTTTTTGACATGGTCTCACTT TGTCACCCAGGCTGGATTGCAGCGGTGCCATCATAGCTCACTGCAGCTTCAGCCTCCCCA GGCTCAGGTGATCCTCCCACCTCAGCCTCCCGTCTCTACAAAAGATACAAAAATTAGTTG AGCGTGGAGGTGCACACCTGGCCTGTGTTGACATTCGTGCCATTGAGCTGTTGGACTTTC TCAGCTCCCTGGTCCTGCTCATCAGCTCCCTCTCACTCACAGTGGTCACCTATGTTTACA TCATCTCCACCATTCTGAAGATACCCTCAGGCCAAGGTCAACGTAAAGCCTTTGCCACCC GTGCCTCTCACTTTACGGTGGTCTCCATGGGCTATGGGATCTCCATCTTTGTCTACTACA GGCGTGCACCTCCATGCCCAGCTAATTTTTGTATCTTTTGTAGAGACGGGGTTTCACCAT GTTGCCCAGGCTGGTGAGTGGTTTTTCCTTATGCCAATATGGAATTTGCCTTTCCATAAC TCCCATGTCCACAAGGATCCAGTATATGGGGAGGATCCTGGAAGTCCCTCAGACTGCAGT GGCCTTTGGGCAGAAAGCAGCATGTCTGCCC |
| Conceptual translation |
PNSLFVSXLLKCFSKIKXTFXXQRQFLKNISSDRILFDS/GCILHHRXGQLSGL SFFFFPFFAFFFFFFF/TWSHFVTQAGLQRCHH\HCSFSLPRXQVILPPQPPV/YK RYKNXSVEV/HLACVDIRAIELLDFLSSLVLLISSLSLTVVTYVYIISTILKIPSGQG QRKAFATRASHFTVVSMGYGISIFVYYRRAPPCPANFCIFCRDGVSPCCPGWXVFPYAN /GICLSITPMSTRIQYMGRILEVPQTAVAFGQKAACLP Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 8 | 21,654,692 | 21,654,692 | SNP | A/T | rs6988908 (DbSNP) | |
| 8 | 21,655,119 | 21,655,119 | SNP | C/T | rs35452299 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 8 | 20,533,044 | 23,111,609 | CopyNumber | Variation_3726 (DGV) |
| 8 | 21,654,498 | 21,657,408 | Deletion | #1 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.