OR7A11P Olfactory Receptor
| Gene Symbol | OR7A11P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | A |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | CIT-HSP-87m17, OST527, HsOR19.3.9P, ORL3791 |
| External Ids | HGNC: 8357 GeneBank: AF399432, AF546658-AF546671, NG_002215 ORDB: ORL3791 |
| Build #39 labels | OR7A11P |
| Chromosomal location | 19:14,916,383-14,917,401 (+) |
| Cluster | 19@15a |
| Synteny | CLIC#45 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7A10 | 75.79% | 318 |
| OR7A17 | 76.71% | 322 |
| OR7A2P | 74.07% | 324 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7A56 | 69% | 323 |
| Mouse | Or7a40 | 67% | 332 |
| Rat | Or7a41 | 69% | 322 |
| Cow | OR7A87 | 70% | 319 |
| Orang | OR7A11B | 86% | 296 |
| Horse | OR7A96 | 72% | 320 |
| Chimp | OR7A11 | 95% | 296 |
Sequence information
| Nucleotide sequence |
TTTTCTCTCATTTTGAAAGTCATTATCAATCACATAGAACCAGGGAATGATACACAGATT TCAGAATTTCTTCTTCTGGGACTTTCAGATAAACCAGAATTGCAGCCCTTCCTCTTTGGG CTGTTCTTCTCCATGTACCTGGTCACTGTGCTTGGGAATCTGCTCATCATCCTGGCCACA ATCTCAGACTCCCACCTCCACACCCCATGTACTTCTTCCTCTCCAACCTGTCCTTTGCGG ACATCTGTTTCATCTCTACTACAATCCCAAAGATGCTCGTAAACATCCAGACACAGAGCA GAGTCATCACTTATGCAGGCTGCATCACCCAGATGTGCTTTTTTGTACTCTTAGAAGCAC TGGACAGCTTACTCCTGACCGTGATGGCCTATGACCAGTTTGTGGCCATCTGTCACCCCC TGCACTACATGGTCATCATGAGCCCCTGGTTCTGTGGACTGCTGGTTCTGGCATCCTGGA TCATCATGAGCCCCTGGCTCTGTGGACTGCTGGTTCTGGCATTCTGGATTATCAGTGATC TGGATTCCTCATTACATAGCTTGATGGTGCTGTCACTGCCCTTCTGCACAGATTTCCAAA TTCCACATTTTGTCTATGAACTTAATCAGGTCATCCGCCTTGCCGGTTCTGATACCTTTC TTAATGACATGGCGATGTATTTTGCAGTAGGGCCACTGGGTGGAGTTCCCCTCGCTGGGA TCCTGTACTTGTACTGTAAGATAGTTTTCTCCATACGTGCAATCTCATCAGCTCAGGGGA AGTACAAGGCATTTTCCACCTGTGCATCTCATCTCTCAGTTGTCTCCTTATTTTATGGTA GGAGCCTAGGGGTGTACTTTAGTTCTGCTCCTACCCAAAACTCTCACTCAGGTGCTGCAG CTTCAGTGATGTACACTGTGGTCACCCCCATGCTGAACCCCTTCATCTGCAGTCTGAGGA ATAAAGACATAAAGAGAGCTCTGAATCAATTCATCAGGGTAGTGCCATTCTTCAGGAAG |
| Conceptual translation |
FSLILKVIINHIEPGNDTQISEFLLLGLSDKPELQPFLFGLFFSMYLVTVLGNLLIILAT ISDSHLH/PMYFFLSNLSFADICFISTTIPKMLVNIQTQSRVITYAGCITQMCFFVLLE ALDSLLLTVMAYDQFVAICHPLHYMVIMSPWFCGLLVLASWIIMSPWLCGLLVLAFWIIS DLDSSLHSLMVLSLPFCTDFQIPHFVYELNQVIRLAGSDTFLNDMAMYFAVGPLGGVPLA GILYLYCKIVFSIRAISSAQGKYKAFSTCASHLSVVSLFYGRSLGVYFSSAPTQNSHSGA AASVMYTVVTPMLNPFICSLRNKDIKRALNQFIRVVPFFRK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 19 | 100 | -100 | SNP | C/A | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI) | |
| 19 | 14,916,441 | 14,916,441 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 19 | 14,916,590 | 14,916,590 | SNP | T/C | 1000GP (CEU) | |
| 19 | 14,916,798 | 14,916,798 | SNP | C/A | 1000GP (CHBJPT) | |
| 19 | 14,916,905 | 14,916,905 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 19 | 14,917,076 | 14,917,076 | SNP | C/T | 1000GP (CEU) | |
| 19 | 14,917,077 | 14,917,077 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 19 | 14,917,281 | 14,917,281 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 19 | 14,917,284 | 14,917,284 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 19 | 14,917,370 | 14,917,370 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 19 | 15,027,253 | 15,027,253 | SNP | C/T | rs73020878 (DbSNP) | |
| 19 | 15,027,539 | 15,027,538 | Ins(1) | -/T | rs55676956 (DbSNP) | |
| 19 | 15,027,610 | 15,027,610 | SNP | A/C | rs55788084 (DbSNP) | |
| 19 | 15,027,644 | 15,027,644 | SNP | C/T | rs73928941 (DbSNP) | |
| 19 | 15,027,717 | 15,027,717 | SNP | C/T | rs11085922 (DbSNP) | |
| 19 | 15,027,888 | 15,027,888 | SNP | C/T | rs58875084 (DbSNP) | |
| 19 | 15,027,889 | 15,027,889 | SNP | A/G | rs59828801 (DbSNP) | |
| 19 | 15,027,970 | 15,027,969 | Ins(1) | -/G | rs34895809 (DbSNP) | |
| 19 | 15,027,982 | 15,027,982 | SNP | A/G | rs4427933 (DbSNP) | |
| 19 | 15,028,003 | 15,028,003 | SNP | G/T | rs73016162 (DbSNP) | |
| 19 | 15,028,093 | 15,028,093 | SNP | A/G | rs1984694 (DbSNP) | |
| 19 | 15,028,096 | 15,028,096 | SNP | C/T | rs73005603 (DbSNP) | |
| 19 | 15,028,182 | 15,028,182 | SNP | A/G | rs1122713 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 19 | 15,027,613 | 15,027,860 | Del(-36) | #27(modil) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.