OR7A18P Olfactory Receptor
| Gene Symbol | OR7A18P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | A |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | ORL3787 |
| External Ids | HGNC: 15399 GeneBank: NG_002278 ORDB: ORL3787 |
| Build #39 labels | OR7A18P |
| Chromosomal location | 19:14,886,846-14,887,272 (-) |
| Cluster | 19@15a |
| Synteny | CLIC#45 |
| Remarks | Disrupted by Alu repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7A10 | 69.66% | 89 |
| OR7A2P | 69.66% | 89 |
| OR7A5 | 70.79% | 89 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7A68 | 55% | 119 |
| Mouse | Or7a36 | 52% | 107 |
| Rat | Or7a36 | 51% | 107 |
| Cow | OR7A10B | 58% | 119 |
| Orang | OR7A185P | 88% | 102 |
| Horse | OR7A96 | 62% | 107 |
| Chimp | OR7A76P | 93% | 106 |
Sequence information
| Nucleotide sequence |
GATGTCCCTGAGTATAATAAAGCAGACGTGGAAGGACACTCATGCAATCTCCTCCCCGTG TGGACCCCTGGAAGCAGGTGTCCCTTCATGATCACAAATTTCTGTCTCCGAGAAGCAAGG CATGTCCTTTCCCAAGAAACTTTTCCAGAATCACAAACTTTTCCTACTCTTTGCAGGGAT GAATGTATTTCTGCAGACTGTGATGGCCTATGACCACTTTGTGGCCATCTGTCACCCCCT GCACTACAGGGTCATCATGAATCCTGGGATCTTTGGACTGTGGGTTCTGGTGTCCTGGAG CATGAGTGCCCTGAATTCCTCACTGCAAAGCAGAATGTGTTGCAGCTGTCCTTCTGCACA AACTTGGAAATCCCCCCATTTTTTTCTGTGAACTTAATCAGTTGATCCTGCTTGCCTGTT CTAACAC |
| Conceptual translation |
DVPEYNKADVEGHSCNL\PCGPLEAGVPSXQISVSEKQGMSFPKKLFQNHKLFLLFAG MNVFLQTVMAYDHFVAICHPLHYRVIMNPGIFGLWVLVSWSMSALNSSLQSR/VLQLSF CTNLEIP/IFFCELNQLILLACSN Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 19 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI) | |
| 19 | 14,887,095 | 14,887,095 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 19 | 14,997,870 | 14,997,870 | SNP | A/G | rs73508597 (DbSNP) | |
| 19 | 14,997,907 | 14,997,907 | SNP | C/T | rs10409376 (DbSNP) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.