OR7A1P Olfactory Receptor
| Gene Symbol | OR7A1P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | A |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR19-3, OLF4p, OR19-21, hg513, HsOR19.3.7P, ORL3788 |
| External Ids | HGNC: 8364 GeneBank: AB065576, AF399433, BK004726, NG_004361 ORDB: ORL3788 |
| Build #39 labels | OR7A1P |
| Chromosomal location | 19:14,891,859-14,892,804 (-) |
| Cluster | 19@15a |
| Synteny | CLIC#45 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7A10 | 78.1% | 306 |
| OR7A17 | 80.39% | 306 |
| OR7A2P | 78.43% | 306 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7A62 | 75% | 304 |
| Mouse | Or7a40 | 72% | 308 |
| Rat | Or7a41 | 71% | 303 |
| Cow | OR7A96 | 74% | 311 |
| Orang | OR7A1CP | 94% | 303 |
| Orang | OR7A1BP | 92% | 308 |
| Horse | OR7A96 | 78% | 311 |
| Chimp | OR7A1 | 97% | 309 |
Sequence information
| Nucleotide sequence |
ATGAAACCAGGGAATGAGACACAAATTTCACAATTCCTTCTCCTGGGACTTTCAGAGGAA CCAGAATTGCAGCCCTTCCTCTTTGGGCTATTTCTGTCCATGTACCTGGTCACCGTGCTC GGGAACCTGCTCATCATCCTGGCCACAATCTCAGACTCCCACCTCCACACCCCCATGTAC TTCTTCCTCTCCAACCTGTCCTTTGCAGACATCTGTTTTGTGTCTACCACTGTCCCAAAG ATGCTGGTGAACATCCAGACACAGAGCAGAGTCATCACCTATGCAGACTGCATCACCCAG ATGTGCTTTTTTATACTCTTTGTAGTGTTGGACAGCTTACTCCTGACTGTGATGGCCTAT GACCGGTTTGTGGCCATCTGTCACCCCCTGCACTACACAGTCATTATGAACTCCTGGCTC TGTGGACTGCTGGTTCTGGTGTCCTGGATCGTGAGCATCCTATATTCTCTGTTACAAAGC ATAATGGCATTGCAGCTGTCCTTCTGTACAGAATTGAAAATCCCTCATTTTTTCTGTGAA CTTAATCAGGTCATCCACCTTGCCTGTTCCGACACTTTTATTAATGACATGATGATGAAT TTTACAAGTGTGCTGCTGGGTGGGGGATGCCTCGCTGGAATATTTTACTTACTTTAAGAT ACTTTGTTGCATATGTTCGATCTCATCAGCTCAGGGGATGAATAAAGCACTTTCCACCTG TGCATCTCACCTCTCAGTTGTCTCCTTATTTTATTGTACAGGCGTAGGTGTGTACCTTAG TTCTGCTGCAACCCATAACTCACTCTCAAATGCTGCAGCCTCGGTGATGTACACTGTGGT CACCTCCATGCTGAACCCCTTCATCTACAGCCTGAGGAATAAAGACATAAACAGAGCTCT GAATCGATTCTTCAGAGAGCAGAAACAGGAGGGCCATTTTCCAGAA |
| Conceptual translation |
MKPGNETQISQFLLLGLSEEPELQPFLFGLFLSMYLVTVLGNLLIILATISDSHLHTPMY FFLSNLSFADICFVSTTVPKMLVNIQTQSRVITYADCITQMCFFILFVVLDSLLLTVMAY DRFVAICHPLHYTVIMNSWLCGLLVLVSWIVSILYSLLQSIMALQLSFCTELKIPHFFCE LNQVIHLACSDTFINDMMMNFTSVLLGGGCLAGI//TYFKILCCICSISSAQGMNKAL STCASHLSVVSLFYCTGVGVYLSSAATHNSLSNAAASVMYTVVTSMLNPFIYSLRNKDIN RALNRFFREQKQEGHFPE Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 19 | 100 | -100 | SNP | A/G | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
| 19 | 14,891,963 | 14,891,963 | SNP | T/C | 1000GP (CHBJPT) | |
| 19 | 14,892,015 | 14,892,015 | SNP | T/G | 1000GP (CHBJPT) | |
| 19 | 14,892,030 | 14,892,030 | SNP | G/T | 1000GP (CEU, CHBJPT) | |
| 19 | 14,892,325 | 14,892,325 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 19 | 14,892,352 | 14,892,352 | SNP | C/G | 1000GP (CEU, CHBJPT) | |
| 19 | 14,892,594 | 14,892,594 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 19 | 14,892,750 | 14,892,750 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 19 | 15,002,677 | 15,002,677 | SNP | G/A | rs61751907 (DbSNP) | |
| 19 | 15,002,684 | 15,002,683 | Ins(1) | -/C | rs34284698 (DbSNP) | |
| 19 | 15,002,720 | 15,002,720 | SNP | T/G | rs61747490 (DbSNP) | |
| 19 | 15,002,775 | 15,002,775 | SNP | T/C | rs61747527 (DbSNP) | |
| 19 | 15,002,827 | 15,002,827 | SNP | G/T | rs7260124 (DbSNP) | |
| 19 | 15,002,842 | 15,002,842 | SNP | T/G | rs61749303 (DbSNP) | |
| 19 | 15,002,853 | 15,002,853 | SNP | C/T | rs10419928 (DbSNP) | |
| 19 | 15,003,137 | 15,003,137 | SNP | G/A | rs61734241 (DbSNP) | |
| 19 | 15,003,164 | 15,003,164 | SNP | C/G | rs61734249 (DbSNP) | |
| 19 | 15,003,406 | 15,003,406 | SNP | C/T | rs12459463 (DbSNP) | |
| 19 | 15,003,562 | 15,003,562 | SNP | C/T | rs61995695 (DbSNP) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.