OR7A3P Olfactory Receptor
| Gene Symbol | OR7A3P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | A |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR14-11, OR14-59, OR14-12, OR11-7b, OR19-12, HsOR19.3.8P, ORL3582 |
| External Ids | HGNC: 8366 GeneBank: AF065859, AF399430, AF399431, NG_002170, U86224, U86225, U86227 ORDB: ORL3582 |
| Build #39 labels | OR7A12P, OR7A14P, OR7A3P |
| Chromosomal location | 19:14,903,242-14,904,173 (-) |
| Cluster | 19@15a |
| Synteny | CLIC#45 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7A10 | 76.95% | 308 |
| OR7A17 | 79.55% | 308 |
| OR7A1P | 75.58% | 303 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7A56 | 76% | 303 |
| Mouse | Or7a36 | 72% | 303 |
| Rat | Or7a41 | 74% | 303 |
| Cow | OR7A96 | 78% | 302 |
| Orang | OR7A3 | 91% | 303 |
| Horse | OR7A96 | 79% | 302 |
| Chimp | OR7A10 | 77% | 309 |
Expression evidences
| Source | Accession |
|---|---|
| GNF Atlas2 | gnf1h03307_at |
Sequence information
| Nucleotide sequence |
ATGGAACCAGAGAATGGTACGAGGATTTTAGGATTTCTTCTTCTGGGACTTTCAGAGGAA CCAGAATTGCAGCCCGTTATGTTTGGACTCTTCCTCTCCATGTATCTGACAACTGTGTTT GGAAACCTGCTCATCATCCTGGCCATCTGCTCTGGTTCCCACCTCCACACCCCCATGTAC TTCTTCCTCTCTAACCTGTCCTTTGTAGACATCTGTGTTACCTCCACCACAGTCCCAAAG ACACTGTCAAACATCCGGACACAGAGTAAAGTCATCACCTATGCAGGTTGCATCACCCAG ATGTACTTTTTTGTACTCTTTATAGTGTTGGACAGCTTACTCTTGACCGTGATGGCCTAT GACCAGTTTGTGGCCATCTGTCACCCCCTGCACTACACGGTCATCGTGAACCCTCGGCTC TGTGGACTGCTGGTTCTGGCGTCCTGGATCATGAGTGCCCTGAATTCCTTGATAGAAAGC TTAATGGTGTTGCCACTGCTCTTTTGTACAGACTTGAAAATCCCCCACTTTTTCTGTGAA CTTAATCAGATAATCCGCAGTGCCTGTTCTGACACCTTTCTTAATGACATGGTGATGTAT TTGTCAGCTGTGCTTCTAGGTAGGGGATGTTTCACTGGGATCCTGTACTCTTACTTTAAG ACAGTTTCCTCCATACGTGCAATCTCATCAGCTCAGGGGAAGTACAAGGCATTTTCCACC TGTGCATCGCACCTCTCAGTTGTCTCCTTATTTTATTGTATGAGCCTTGGGGTGTACCTT AGTGCTGCTGCAACCCACAACTCACTCTCAAGTGCAACAGCCTCTGATGTACACTGTGGT CACCCCCATGCTGAACCCCTTCATCTACAGTCTGAGGAATAAAGACATAAAGGGGGCTCT AAAACAATTCTTCAGAAGGAAGAAATAAAATG |
| Conceptual translation |
MEPENGTRILGFLLLGLSEEPELQPVMFGLFLSMYLTTVFGNLLIILAICSGSHLHTPMY FFLSNLSFVDICVTSTTVPKTLSNIRTQSKVITYAGCITQMYFFVLFIVLDSLLLTVMAY DQFVAICHPLHYTVIVNPRLCGLLVLASWIMSALNSLIESLMVLPLLFCTDLKIPHFFCE LNQIIRSACSDTFLNDMVMYLSAVLLGRGCFTGILYSYFKTVSSIRAISSAQGKYKAFST CASHLSVVSLFYCMSLGVYLSAAATHNSLSSATAS\YTVVTPMLNPFIYSLRNKDIKGA LKQ\SEGRNKM Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 19 | 100 | -100 | SNP | T/C | 1000GP (YRI, YRI, YRI, YRI, YRI) | |
| 19 | 14,903,377 | 14,903,377 | SNP | T/C | 1000GP (CEU) | |
| 19 | 14,903,390 | 14,903,390 | SNP | C/A | 1000GP (CEU) | |
| 19 | 14,903,417 | 14,903,417 | SNP | A/C | 1000GP (CEU) | |
| 19 | 14,903,424 | 14,903,424 | SNP | T/C | 1000GP (CEU) | |
| 19 | 14,903,623 | 14,903,623 | SNP | A/G | 1000GP (CHBJPT) | |
| 19 | 14,903,716 | 14,903,716 | SNP | G/A | 1000GP (CEU) | |
| 19 | 14,903,907 | 14,903,907 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 19 | 15,014,153 | 15,014,153 | SNP | A/T | rs11882391 (DbSNP) | |
| 19 | 15,014,162 | 15,014,161 | Ins(2) | -/CT | rs35639269 (DbSNP) | |
| 19 | 15,014,189 | 15,014,189 | SNP | C/T | rs3897851 (DbSNP) | |
| 19 | 15,014,194 | 15,014,194 | SNP | G/T | rs4575643 (DbSNP) | |
| 19 | 15,014,202 | 15,014,202 | SNP | A/C | rs4128487 (DbSNP) | |
| 19 | 15,014,236 | 15,014,236 | SNP | C/T | rs11672922 (DbSNP) | |
| 19 | 15,014,613 | 15,014,613 | SNP | C/T | rs10416804 (DbSNP) | |
| 19 | 15,014,719 | 15,014,719 | SNP | G/A | rs4134457 (DbSNP) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.