OR7E100P Olfactory Receptor
| Gene Symbol | OR7E100P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR3.4.1P, ORL3116 |
| External Ids | HGNC: 15048 GeneBank: NG_004266 ORDB: ORL3116 |
| Build #39 labels | OR7E100P |
| Chromosomal location | 3:112,524,186-112,525,200 (-) |
| Cluster | 3@112 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E102P | 90.03% | 331 |
| OR7E111P | 90.21% | 327 |
| OR7E22P | 85.76% | 337 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 73% | 315 |
| Mouse | Or7e178 | 68% | 308 |
| Rat | Or7e173 | 65% | 308 |
| Cow | OR7E186 | 72% | 305 |
| Orang | OR7E111P | 90% | 296 |
| Orang | OR7E111BP | 90% | 296 |
| Orang | OR7E102 | 89% | 290 |
| Horse | OR7E225 | 70% | 315 |
| Chimp | OR7E115P | 85% | 317 |
| Chimp | OR7E102P | 85% | 315 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | GD256858 |
Sequence information
| Nucleotide sequence |
ATTTTTCCAATCCTCTTTTCTTCTCAAAAAAAGAGGTGTCCAAGTCACACAGAGCCATAG AATCTCACAAGTGTCTCAGAATTCCTTCTCCAGGGACTCTCAGAGGATCCAGAACTGCAG CCCGTCCTCGCTGGGCTGTCCCTGTCCATGTACCTGGTCACGGTGCTGAGGAACCTGCTC ATCATCCTGGCTGTCAGCTCTGACTCCCACCTCCACACCCCCATGTACTTCTTCCTCTCC AACCTCTCCTGGGCTGACATTGGTTTCACCTCGGCCATGGTTCCCAAGATGATTGTGGAC ATGCAGTCGCATAGCAGAGTCATCTCTTAAGCGGGCTGCCTGACACAGATGTCTTTCTTT GTCCTTTTTGCATGTATAGAAGACATGCTCCTGACTGTGATGGCCTATGACCAATTTGTG GCCATCTGTCACCCCTGCACTACCCAGTCATCATGAATCCTCACCTCTGTGTCTTCTTAG TTTTGGTTTCTTTTTTCCTTAGCCTGTTGGATTCCCAGCTGCACAGTTGGATTGTGTTAC AATTCACCTTCTTCAAGAATGTGGAAATCTCTAATTTTTTCTGTGATCCATCTCAACTTC TCAACCTTGCCTGTTCTGACGGCATCATCAATAGCATATTTATATATTTAGATAGTATTC TGTTCAGTTTTCTTCCCATTTCAGGGATCCTTTTGTCTTACTATAAAATTGTCCCCTCCA TTCTAAGAATTTCATCGTCAGATGGGAAGTATAAAGCCTTCTCCATCTGTGGCTCTCACC TGGCAGTTGTTTGCTTATTTTATGGAACAGGCATTGGCGTGTACCTAACTTCAGCTGTGT vvCACCACCCCCAGGAATGGTGTGGTGGCGTCAGTGATGTATGCTGTGGGCACCCCCATG CTGAACTCTTTTATCTACAGCCTGAGAAACAGGGACATTCAAAGCGCCCTGTGGAGGCTG CGCAGCAGAACAGTCGAATCTCATGATCTGTTCCATCCTTATTCTTGTGTGGGTAAG |
| Conceptual translation |
IFPILFSSQKKRCPSHTEPXLTSVSEFLLQGLSEDPELQPVLAGLSLSMYLVTVLRNLL IILAVSSDSHLHTPMYFFLSNLSWADIGFTSAMVPKMIVDMQSHSRVISXGCLTQMSFF VLFACIEDMLLTVMAYDQFVAIC/PLHYPVIMNPHLCVFLVLVSFFLSLLDSQLHSWIV LQFTFFKNVEISNFFCDPSQLLNLACSDGIINSIFIYLDSILFSFLPISGILLSYYKIVP SILRISSSDGKYKAFSICGSHLAVVCLFYGTGIGVYLTSAVSPPP/NGVVASVMYAVGT PMLNSFIYSLRNRDIQSALWRLRSRTVESHDLFHPYSCVGK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 3 | 112,243,229 | 112,243,229 | SNP | C/T | rs7615899 (DbSNP) | |
| 3 | 112,243,924 | 112,243,924 | SNP | C/T | rs6772077 (DbSNP) | |
| 3 | 112,243,635 | 112,243,635 | SNP | T/C | rs2933141 (DbSNP) | |
| 3 | 112,524,788 | 112,524,788 | SNP | T/C | 1000GP (CEU, CHBJPT) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 3 | 112,243,739 | 112,243,963 | Del(-16) | #3(modil) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| ATG3andOR7E100P.jApr07 | main_exon | CDS_partial | chr3 | 112,525,062 | 112,525,167 | - |
| exon_5UTR | chr3 | 112,530,275 | 112,530,394 | - | ||
| exon_5UTR | chr3 | 112,536,475 | 112,536,893 | - | ||