OR7E106P Olfactory Receptor
| Gene Symbol | OR7E106P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR14-NP2, OST215, HsOR14.5.2P, ORL3708 |
| External Ids | HGNC: 15365 GeneBank: AF399387, BK004810, NG_004170 ORDB: ORL3708 |
| Build #39 labels | OR7E106P, OR7E40P |
| Chromosomal location | 14:51,763,094-51,764,040 (-) |
| Cluster | 14@52 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E33P | 89.21% | 315 |
| OR7E36P | 89.27% | 317 |
| OR7E37P | 89.87% | 316 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 68% | 315 |
| Mouse | Or7e178 | 65% | 305 |
| Rat | Or7e173 | 63% | 308 |
| Cow | OR7E186 | 68% | 302 |
| Orang | OR7E14P | 84% | 315 |
| Orang | OR7E12P | 83% | 311 |
| Orang | OR7E31DP | 87% | 297 |
| Orang | OR7E53P | 82% | 311 |
| Horse | OR7E225 | 68% | 309 |
| Chimp | OR7E36P | 87% | 317 |
| Chimp | OR7E31P | 87% | 314 |
| Chimp | OR7E33P | 86% | 315 |
| Chimp | OR7E38P | 85% | 315 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BG186361 |
Sequence information
| Nucleotide sequence |
TGTCCAATCTCTAGAGACCCACAGAATCTAACAGATGTCTCTATATTCCTCCTCCTAGAA GCTCAGAGGATCCAGAACGGCAGCCGGTCCTCACTGGGCTGTTCCTGTCCACGTGCCTGG TCATGGCGCTGGGGAACCTGCTCATCATCCTGGCCATCAGCCCTGACTCCCACCTCCACA CCCCCATGTACTTCTTCCTCTCCAACCTGTCCTTGCCTGACATCAGTTTCACCTCCACCA CAGTCCCCAAGATGACTGTGGACATCCAATCTCACAGCAGAGTCATCTCCTATGCAGGCT GCCTGACTCAGATGTCTCTCTTTGCCATTTTTGGAGGCATGGAAGACAGACATACTCCTG AGTGTGATGGCCTATGACCAGTTTGTAGCCAAATGTCACCCTCTATATCATTCAGCCATC ATGAACCCGTGTTTCTGTGGCTTTCTACTTTTGTTGTCTTTTTTTTTTCCCTCAGTCTTT TAGATGCCCAGCTGTACAATTTGATTGCCTTACAAATGACCTGCTTCAAGGATGTGGAAA TTCCTAATTTCTTCTGTGACCCTTCTCAACTCCCCCATCTTGCATGTTGTGACACCTTCA ACAATAACATAATCCTGTATTTCCCTGATGCCATATTTGGTTTTCTTCCCATCTCGGGGA CACTTTTCTCTTACGATAAAATTGTTTCCTCCATTCTGAGGGTTTCATCATCAGGTGGGA AGTATAAAGCCTTCTCCACCTATGGGTCTCACCTGTCAGATGTTTCCTGATTTTATGGAA CAGGCGTTGGAGGGTACCTCAGTTCAGATGTGTCATCTTCCCCGAGAAAGACTGCAGTGG CCTCAGTGATGTACGCAGTGGTCACCCCCATGATGAACCCCTTCATCTACAGTCCGAGAA ACAGGGATATGAAAAGTGTCCTGCGGCGGCCGCACGGCAGCACGTTC |
| Conceptual translation |
CPISRDPQNLTDVSIFLLLE/SEDPERQPVLTGLFLSTCLVMALGNLLIILAISPDSHL HTPMYFFLSNLSLPDISFTSTTVPKMTVDIQSHSRVISYAGCLTQMSLFAIFGGME\DI LLSVMAYDQFVAKCHPLYHSAIMNPCFCGFLLLLSFFF/LSLLDAQLYNLIALQMTCFK DVEIPNFFCDPSQLPHLACCDTFNNNIILYFPDAIFGFLPISGTLFSYDKIVSSILRVSS SGGKYKAFSTYGSHLSDVSXYGTGVGGYLSSDVSSSPRKTAVASVMYAVVTPMMNPFIY SPRNRDMKSVLRRPHGSTF Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 14 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI) | |
| 14 | 51,763,186 | 51,763,186 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 14 | 51,763,440 | 51,763,440 | SNP | T/G | 1000GP (CEU) | |
| 14 | 51,763,644 | 51,763,644 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 14 | 52,229,904 | 52,229,904 | SNP | C/T | rs57839902 (DbSNP) | |
| 14 | 52,230,001 | 52,230,001 | SNP | C/T | rs59231473 (DbSNP) | |
| 14 | 52,230,158 | 52,230,158 | SNP | G/T | rs56825043 (DbSNP) | |
| 14 | 52,230,341 | 52,230,341 | SNP | C/T | rs4414400 (DbSNP) | |
| 14 | 52,230,359 | 52,230,359 | SNP | C/G | rs34701364 (DbSNP) | |
| 14 | 52,230,362 | 52,230,362 | SNP | A/G | rs12885717 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 218 (Hasin) | |||
| 14 | 52,212,766 | 52,246,833 | CopyNumber | Variation_71900 (DGV) |
| 14 | 52,215,384 | 52,239,627 | CopyNumber | Variation_87223 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E106P.aApr07-unspliced | main_exon | CDS_partial | chr14 | 51,763,767 | 51,763,961 | - |