OR7E109P Olfactory Receptor
| Gene Symbol | OR7E109P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR9.3.1P, ORL325 |
| External Ids | HGNC: 15118 GeneBank: AF399394, NG_004386 ORDB: ORL325 |
| Build #39 labels | OR7E109P |
| Chromosomal location | 9:90,742,502-90,743,448 (-) |
| Cluster | 9@94 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E31P | 94.62% | 316 |
| OR7E33P | 92.41% | 316 |
| OR7E46P | 92.09% | 316 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E153 | 73% | 311 |
| Mouse | Or7e178 | 68% | 311 |
| Rat | Or7e173 | 66% | 307 |
| Cow | OR7E186 | 72% | 307 |
| Orang | OR7E15P | 90% | 316 |
| Orang | OR7E14P | 87% | 316 |
| Orang | OR7E31DP | 91% | 297 |
| Horse | OR7E225 | 72% | 311 |
| Chimp | OR7E31P | 93% | 316 |
| Chimp | OR7E36P | 91% | 318 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BG187898 |
Sequence information
| Nucleotide sequence |
TGTCCAATCTCTACAGACCCACAGAATCTAATAGATGTCTCTATATTCCTCCTCCTAGAA CCTCAGAGGATCCAGAACGGCAGCTGGTCCTTGCTGGGCTGTTCCTGTCCATGTGCCTGG TCACGGTGCTGGGGAACCTGCTCATCATCCTGGCCGTCAGTCCTGACTCCCACCTCCACA CCCCCATGTACTTCTTCCTCTCCAACCTATCCTTGCCTGACATCGGTTTCACCTCCACCA CGGTCCCCAAGATGATTGTGGACATCCGATCTCACAGCAGAGTCATCTCCTATGCAGGCT GCCTGACTCAGACATCTCTCTTTGCCATTTTTGGAGGCATGGAAGAGAGACATGCTCCTG AGTGTGATGGCCTATGACCAGTTTGTAGCCATCTGTCACCCTCTATATCATTCAGCCGTC ATGAACCCTTGTTTCTGTGGCTTTCTAGTTTTGTTGACTTTTTTTTTTTTCTCAGTCTTT TAGACGCCCAGCTGCACAACTTGATTGCCTTACAAATGACCTGCTTCAAGGATGTGGAAA TTCCTAATTTCTTCTGTGACCCTTCTCCACTCCCCCATCTTGCATGTTGTGACACCTTCA CCAATAACATAATCATGTATTTCCCTGCTGCCATATTTGGTTTTCTTCCCATCTCGGGGA CCCTTTTCTCTTACTATAAAATTGTTTCCTCCATTCTGAGGGTTTCATCATCAGGTGGGA AGTATAAGGCCTTCTCCACCTGTGGGTCTCACCTGTCGGTTGTTTGCTGATTTTATGGAA CAGGCATTGGAGGGTACCTCAGTTCAGATGTGTCATCTTCCCCGAGAAAGGCTGCGGTGG CCTCAGTGATGTACACGGTGGTCACCCCCATGCTGAACCCCTTCATCTACAGCCTGAGAA ACAGGGATATTAAAAGTGTCCTGCGGTGGCTGCACGGCAGCTCTGTC |
| Conceptual translation |
CPISTDPQNLIDVSIFLLLE/SEDPERQLVLAGLFLSMCLVTVLGNLLIILAVSPDSHL HTPMYFFLSNLSLPDIGFTSTTVPKMIVDIRSHSRVISYAGCLTQTSLFAIFGGMEE\M LLSVMAYDQFVAICHPLYHSAVMNPCFCGFLVLL/FFFFLSLLDAQLHNLIALQMTCFK DVEIPNFFCDPSPLPHLACCDTFTNNIIMYFPAAIFGFLPISGTLFSYYKIVSSILRVSS SGGKYKAFSTCGSHLSVVCXYGTGIGGYLSSDVSSSPRKAAVASVMYTVVTPMLNPFIY SLRNRDIKSVLRWLHGSSV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 9 | 93,505,508 | 93,505,508 | In-Del(1) | -/G | rs72508126 (DbSNP) | |
| 9 | 93,505,413 | 93,505,413 | SNP | A/G | rs10821494 (DbSNP) | |
| 9 | 93,505,570 | 93,505,570 | SNP | A/G | rs4002859 (DbSNP) | |
| 9 | 93,505,442 | 93,505,442 | SNP | A/G | rs3956147 (DbSNP) | |
| 9 | 93,505,707 | 93,505,707 | SNP | C/G | rs12156627 (DbSNP) | |
| 9 | 93,505,232 | 93,505,232 | SNP | C/T | rs36100897 (DbSNP) | |
| 9 | 93,505,463 | 93,505,463 | SNP | C/T | rs3956148 (DbSNP) | |
| 9 | 93,505,417 | 93,505,417 | SNP | C/T | rs1148850 (DbSNP) | |
| 9 | 93,505,522 | 93,505,522 | SNP | C/T | rs4002858 (DbSNP) | |
| 9 | 93,505,575 | 93,505,575 | SNP | C/T | rs10481712 (DbSNP) | |
| 9 | 93,504,950 | 93,504,950 | SNP | G/A | rs1148849 (DbSNP) | |
| 9 | 93,505,590 | 93,505,590 | SNP | G/T | rs3956149 (DbSNP) | |
| 9 | 93,505,098 | 93,505,098 | SNP | T/C | rs1054451 (DbSNP) | |
| 9 | 93,505,104 | 93,505,104 | SNP | T/C | rs1054450 (DbSNP) | |
| 9 | 90,742,992 | 90,742,992 | SNP | T/A | 1000GP (CEU) | |
| 9 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 9 | 93,502,784 | 93,505,830 | CopyNumber | #46 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E109P.aApr07-unspliced | main_exon | CDS_partial | chr9 | 90,742,826 | 90,743,372 | - |