OR7E10P Olfactory Receptor
| Gene Symbol | OR7E10P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | AC000385-A, HsOR8.5.3P, ORL3214 |
| External Ids | HGNC: 8381 GeneBank: AF399403, NG_002183 ORDB: ORL3214 |
| Build #39 labels | OR7E10P |
| Chromosomal location | 8:12,703,052-12,704,038 (-) |
| Cluster | 8@13 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E108P | 85.76% | 330 |
| OR7E111P | 85.85% | 325 |
| OR7E4P | 86.06% | 330 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 68% | 317 |
| Mouse | Or7e178 | 64% | 308 |
| Rat | Or7e173 | 60% | 308 |
| Cow | OR7E191P | 65% | 305 |
| Orang | OR7E100P | 84% | 315 |
| Orang | OR7E103P | 83% | 306 |
| Orang | OR7E111P | 85% | 296 |
| Horse | OR7E225 | 65% | 316 |
| Chimp | OR7E115P | 82% | 318 |
| Chimp | OR7E102P | 81% | 320 |
Sequence information
| Nucleotide sequence |
CTTTTCTTCTCAAGGTGTCCAAGTCACACAGAGCCACGGAATCTCACAGGTGTCTGAAAA GTGCTCCTGGGACTCTCTCTGAGAGGATCCAGAACTGCAGCCCATCCTCGCTGGGCTGTC CCTGTCCATGTATCTGGTCACGGTGCTGAGGAACGTGCTCATCATCCTGGCTGTCAGCTC TGACTCCCACCTCCACACCCCCATGTACTTCTTCCTCTCCAGCCTGTGCTGGGCTGACAT CGGTTTCACCTCGGCCACTGTTCCCAAGATGACTGTGGACATGCAGTCGCATAGCAGAGT CATCTCTTATGTGAGCTGCCTGACACAGATATCTTTCTTGGTCCTTTTTGCATGTATGGA AGACATGCTCCTGTGATGGCCTATGACAGAGTTGTGGCCATCTGTCACCCCCTGCACTAT CCAGTCATCATGAATCCTCACCTTCGTGTCTTCTTAGTTTTGCTGTCCTTTTTCCTTAGC TTGTTGGATTCCCAGCTGCACAGTTGGATTGTGTTACAATTCACCTTATTCAAGAATGTG GAAAACTCTAGTTTTGTCTGTGACCCCTCTCAACTTCTCAACCTTGCCTGTTCTGACAGC GTCATCAATAGCATATTCATATATTTCGATAGTACTATGTTTGGTTTTCTTCCCATTTCA GGGATCCTTTTATCTTACTATAAAATTGTCCCCTCCATTCTAAGGATGTCATCATCAGAT GGGAAGTATAAAGCCTTCTCCACCTATGGCTCTCAACTGGCAGCTCTTTGCTGATTTTAT GGAACAGGCATTGGCATGTACCTGACTTCAGCTGTGGCACTACCCCCCAGGAATGGTGTC GTGGCATCAGTGATGTAGGCTGTGGTCACCCCCATGCTGAACTTTTTCATCTACAGCCTG AGAAACAGGGACATACAAAGTGCCCTGCGGAGGCTGCGCAGCAGAACAGTCGAATCTCAT GATCTGTTCCATCCTTTTTCTTGTGTG |
| Conceptual translation |
LFFSRCPSHTEPRNLTGVXVLLG\LXDPELQPILAGLSLSMYLVTVLRNVLIILAVS SDSHLHTPMYFFLSSLCWADIGFTSATVPKMTVDMQSHSRVISYVSCLTQISFLVLFACM EDML/VMAYDRVVAICHPLHYPVIMNPHLRVFLVLLSFFLSLLDSQLHSWIVLQFTLFK NVENSSFVCDPSQLLNLACSDSVINSIFIYFDSTMFGFLPISGILLSYYKIVPSILRMSS SDGKYKAFSTYGSQLAALCXYGTGIGMYLTSAVALPPRNGVVASVMXVVTPMLNFFIY SLRNRDIQSALRRLRSRTVESHDLFHPFSCV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 8 | 12,560,641 | 12,560,640 | Ins(1) | -/C | rs34276893 (DbSNP) | |
| 8 | 12,561,383 | 12,561,382 | Ins(1) | -/G | rs35407967 (DbSNP) | |
| 8 | 12,561,180 | 12,561,180 | SNP | A/G | rs17094925 (DbSNP) | |
| 8 | 12,561,182 | 12,561,182 | SNP | A/G | rs28660067 (DbSNP) | |
| 8 | 12,560,886 | 12,560,886 | SNP | C/G | rs73202620 (DbSNP) | |
| 8 | 12,560,704 | 12,560,704 | SNP | C/T | rs28419383 (DbSNP) | |
| 8 | 12,560,761 | 12,560,761 | SNP | C/T | rs28715388 (DbSNP) | |
| 8 | 12,560,885 | 12,560,885 | SNP | C/T | rs73202619 (DbSNP) | |
| 8 | 12,560,743 | 12,560,743 | SNP | C/T | rs634443 (DbSNP) | |
| 8 | 12,560,927 | 12,560,927 | SNP | T/C | rs72485375 (DbSNP) | |
| 8 | 12,703,376 | 12,703,376 | SNP | C/T | 1000GP (CEU) | |
| 8 | 12,703,377 | 12,703,377 | SNP | C/G | 1000GP (CEU) | |
| 8 | 12,703,681 | 12,703,681 | SNP | C/T | 1000GP (CHBJPT) | |
| 8 | 12,703,884 | 12,703,884 | SNP | C/G | 1000GP (CHBJPT) | |
| 8 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 8 | 11,845,324 | 12,601,971 | CopyNumber | Variation_2736 (DGV) |
| 8 | 11,741,558 | 12,567,301 | CopyNumber | Variation_3720 (DGV) |
| 8 | 11,904,529 | 12,601,971 | CopyNumber | Variation_8596 (DGV) |
| 8 | 12,220,249 | 12,586,261 | CopyNumber | Variation_8597 (DGV) |
| 8 | 12,551,156 | 12,570,199 | CopyNumber | Variation_10238 (DGV), Variation_52366 (DGV) |
| 8 | 12,001,978 | 12,588,283 | CopyNumber | Variation_34527 (DGV) |
| 8 | 12,231,851 | 12,567,977 | CopyNumber | Variation_95262 (DGV) |
| 8 | 12,451,520 | 12,567,977 | CopyNumber | Variation_95265 (DGV) |
| 8 | 12,558,561 | 12,561,647 | Deletion | #271 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.