OR7E110P Olfactory Receptor
| Gene Symbol | OR7E110P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | hg523, hg674, OR912-109, OR912-108, OR912-110, OR912-46, HsOR10.1.1P, ORL3267 |
| External Ids | HGNC: 15126 GeneBank: NG_004251 ORDB: ORL3267 |
| Build #39 labels | OR7E110P, OR7E68P |
| Chromosomal location | 10:14,986,876-14,987,471 (-) |
| Cluster | 10@15 |
| Synteny | CLIC#0 |
| Remarks | Disrupted by Alu repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E129P | 91.81% | 171 |
| OR7E140P | 92.98% | 171 |
| OR7E90P | 92.4% | 171 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E181 | 68% | 166 |
| Mouse | Or7e177 | 60% | 168 |
| Rat | Or7e166 | 58% | 169 |
| Cow | OR7E186 | 70% | 158 |
| Orang | OR7E218P | 89% | 161 |
| Orang | OR7E103P | 92% | 148 |
| Horse | OR7E220 | 68% | 161 |
| Chimp | OR7E161BP | 91% | 169 |
| Chimp | OR7E161EP | 90% | 167 |
| Chimp | OR7E163BP | 89% | 169 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BG182279 |
Sequence information
| Nucleotide sequence |
CTTTCCTTCTCAAGGTGTCCAAGACACACAGAGCCACGGAATCTCACAGGTGTCTGAGAA TTCCTCCTCCTGGGACTCTCAGAGGATCCAGAACTGCAGCCTGTCCTCGCTTTGCTGTCC CTGTCCCTGTCCCTGTCCTTGTATCTGGTCATGGTTCTGAGGAACCTGCTCAGCATCCTG GCTGTCAGCTCTGACTCCCCCCTCCATACCCCCATGTACTTCTTCCTCTCCAACCTGTGC TGGGCTGACATCGGGTTCACTTCGGCCACGGTTCCCAAGGTGACTGTGGACATGCAGTCG CATAGCAGAGTCATCTCTCATGCGGGCTGCCTGACACAGATGTCTTTCTTGGTCCTTTTT TGCATGTATAGAATGCATGCTCCTGACTGTGATGGCCTATGACGGCTTTGTAGCCATCTG TCTCCCTCTGCACTACCCAGTCATCATGAATCCTCACCTCTGTGTCTTCTTCGTTTTGGT GTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCTGCACGGTTGGATTGTGTGACAATTCAC CATCATCAAGAATGTGGAAATCTCTCATTTTGTCTGTGACCCCTCTCAACTTCTCA |
| Conceptual translation |
LSFSRCPRHTEPRNLTGVXFLLLGLSEDPELQPVLALLSLSLSLSLYLVMVLRNLLSIL AVSSDSPLHTPMYFFLSNLCWADIGFTSATVPKVTVDMQSHSRVISHAGCLTQMSFLVLF \CIECMLLTVMAYDGFVAICLPLHYPVIMNPHLCVFFVLVSFFLSLLDSQL Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 10 | 100 | -100 | SNP | C/A | 1000GP (YRI, YRI) | |
| 10 | 14,986,941 | 14,986,941 | SNP | C/A | 1000GP (CEU, CHBJPT) | |
| 10 | 14,987,098 | 14,987,098 | SNP | A/C | 1000GP (CEU, CHBJPT) | |
| 10 | 14,987,316 | 14,987,316 | SNP | A/C | 1000GP (CEU, CHBJPT) | |
| 10 | 15,025,280 | 15,025,280 | large insertion | 11692bp insertion | rs72485834 (DbSNP) | |
| 10 | 15,028,940 | 15,028,940 | SNP | A/C | rs12358080 (DbSNP) | |
| 10 | 15,029,097 | 15,029,097 | SNP | A/C | rs35581381 (DbSNP) | |
| 10 | 15,029,264 | 15,029,264 | SNP | A/G | rs7918583 (DbSNP) | |
| 10 | 15,029,315 | 15,029,315 | SNP | A/C | rs11259420 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 10 | 14,955,178 | 15,060,883 | CopyNumber | Variation_53139 (DGV) |
| 10 | 14,975,171 | 15,070,615 | CopyNumber | Variation_53843 (DGV) |
| 10 | 14,982,997 | 15,064,838 | CopyNumber | Variation_23238 (DGV) |
| 10 | 14,990,369 | 15,060,883 | CopyNumber | Variation_29584 (DGV), Variation_48486 (DGV), Variation_48487 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.