OR7E111P Olfactory Receptor
| Gene Symbol | OR7E111P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR13-1, HsOR13.4.1P, ORL3677 |
| External Ids | HGNC: 15344 GeneBank: AF399414, BK004785, NG_004173 ORDB: ORL3677 |
| Build #39 labels | OR7E111P |
| Chromosomal location | 13:67,902,244-67,903,224 (+) |
| Cluster | 13@68 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E102P | 90.03% | 331 |
| OR7E108P | 92.35% | 327 |
| OR7E116P | 92.05% | 327 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E153 | 71% | 312 |
| Mouse | Or7e178 | 67% | 308 |
| Rat | Or7e173 | 63% | 308 |
| Cow | OR7E191P | 69% | 305 |
| Orang | OR7E100P | 87% | 315 |
| Orang | OR7E111CP | 87% | 314 |
| Horse | OR7E225 | 70% | 312 |
| Chimp | OR7E115P | 90% | 315 |
| Chimp | OR7E102P | 87% | 315 |
| Chimp | OR7E116P | 91% | 297 |
Expression evidences
| Source | Accession |
|---|---|
| GNF Atlas2 | 216476_at |
Sequence information
| Nucleotide sequence |
TGTCCAAGTCACACAGAGCCATGGAATCTCACAGGTGTCTGAGAATTCCTCCTCCTGGGA CTCTCAGAGGATCCAGAACTGCAGCCCGTCCTCGCTGGGTTGTCCCGGTCCATGTATCTG GTCATGGTGCTGAGGAACCTGCTCATCATCCTGGCTGTCAGCTCTGACTCCCACCTCCAC ACCCCCATGTACTTCTTCCTCTCCAACCTGTGCTGGGCTGACATCGGTTTCACCTCGGCC ATGGTTCCCAAGATGATTGTGGACATGCAGTCTCATAGCAGAGTCATCTCTTATGCGGGC TGCCTGACACGGATGTCTTTCTTGGTCCTTTTTGCATGTATAGAAGACATGCTCCTGACT GCGATGGCCTATGACTGCTTTGTAGCCATCTGTCGCCCTCTGCACTACCCAGTCATCGTG AATCCTCACCTCTCTGTCTTCTTAGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCC CAGCTGCACAGTTAGATTGTGTTACAATTCACCTTCTTCAAGAATGTGGAAATCTCTAAT TTTGTCTGTGAGCCATCTCAGCTTCTCAACCTTGCCTGTTCTGACAGCGTCATCAATAGC ATATTCTTATATTTCGATAGTACTATGTTTGGTTTTCTTCCCATTTCAAGGATCCTTTTG TCTTACTATAAAATTGTCCCCTCTATTCTAAGGATTTCATCGTCAGATGGGAAGTATAAA GCCTTCTCCACCTGTGGCTCTCACCTGGCAGTTGTTTGCTTATTTTATGGAACAGGCATT GGCGTGTACCTGACTTCAGCTGTGTCACCACCCCCCAGGAGTGGTGTGGTGGCGTCAGTG ATGTACGCTGTGGTCACCCCCATGCTGAACCCTTTCATCTATAGCCTGAGAAACAGAGAC ATTCAAAGCGCCCTCTGGAGGCTGCGCAGCAGAACAGTCGAATCTCATGATCTGTTCCAT CCTTTTTCTTGTGTGGGTAAG |
| Conceptual translation |
CPSHTEPWNLTGVXFLLLGLSEDPELQPVLAGLSRSMYLVMVLRNLLIILAVSSDSHLH TPMYFFLSNLCWADIGFTSAMVPKMIVDMQSHSRVISYAGCLTRMSFLVLFACIEDMLLT AMAYDCFVAICRPLHYPVIVNPHLSVFLVLVSFFLSLLDSQLHSXVLQFTFFKNVEISN FVCEPSQLLNLACSDSVINSIFLYFDSTMFGFLPISRILLSYYKIVPSILRISSSDGKYK AFSTCGSHLAVVCLFYGTGIGVYLTSAVSPPPRSGVVASVMYAVVTPMLNPFIYSLRNRD IQSALWRLRSRTVESHDLFHPFSCVGK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 13 | 68,476,738 | 68,476,738 | SNP | A/G | rs17082976 (DbSNP) | |
| 13 | 68,476,442 | 68,476,442 | SNP | A/G | rs9541246 (DbSNP) | |
| 13 | 68,476,418 | 68,476,418 | SNP | A/G | rs9541245 (DbSNP) | |
| 13 | 68,477,122 | 68,477,122 | SNP | A/G | rs176418 (DbSNP) | |
| 13 | 68,477,024 | 68,477,024 | SNP | A/G | rs12561359 (DbSNP) | |
| 13 | 68,476,807 | 68,476,807 | SNP | C/G | rs9541247 (DbSNP) | |
| 13 | 68,476,397 | 68,476,397 | SNP | C/T | rs289056 (DbSNP) | |
| 13 | 68,477,059 | 68,477,059 | SNP | C/T | rs176417 (DbSNP) | |
| 13 | 68,476,664 | 68,476,664 | SNP | C/T | rs7983616 (DbSNP) | |
| 13 | 68,477,134 | 68,477,134 | SNP | C/T | rs7319270 (DbSNP) | |
| 13 | 67,902,675 | 67,902,675 | SNP | C/G | 1000GP (CEU, CHBJPT) | |
| 13 | 100 | -100 | SNP | C/G | 1000GP (YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.