OR7E115P Olfactory Receptor
| Gene Symbol | OR7E115P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR10-2, HsOR10.1.3P, ORL3269 |
| External Ids | HGNC: 15127 GeneBank: AF399411, BK004797, NG_004692 ORDB: ORL3269 |
| Build #39 labels | OR7E115P |
| Chromosomal location | 10:15,007,872-15,008,879 (-) |
| Cluster | 10@15 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E108P | 88.39% | 336 |
| OR7E129P | 87.28% | 338 |
| OR7E4P | 87.8% | 336 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 66% | 328 |
| Mouse | Or7e178 | 63% | 308 |
| Rat | Or7e173 | 61% | 308 |
| Cow | OR7E186 | 63% | 327 |
| Orang | OR7E100P | 85% | 315 |
| Orang | OR7E103P | 87% | 306 |
| Orang | OR7E111CP | 84% | 311 |
| Orang | OR7E111P | 86% | 297 |
| Horse | OR7E225 | 66% | 322 |
| Chimp | OR7E163P | 85% | 320 |
| Chimp | OR7E102P | 83% | 320 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | AA219029 |
| mRNA | BX648694 |
Sequence information
| Nucleotide sequence |
GTTTTTATCTTTTCTTTTTCCAATCCTCTTTTCTTCCCAAGGTGTCCAAGTCACACAGAG CCACAGAATCTCACAGGTATCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCAGAA CTGCAGCCGGTCCTCGCTGGGCTGTCCCTGTCCATGTATCTGGTCACGGTGCTGAGGAAC CTGCTCAGCACCCTGGCTGTCAGCTCTGACTCCCCCCTCCACACCCCCATGTACTTCTTC CTCTCCAACCTGTGCTGGGCTGACATCGGTTTCACCTTGGCCATAGTTCCCAAGATGACT GTGGACATGCAGTCTCATAGCAGAGTCATCTCTCATGCGGGCTGCCTGACACAGATGTCT TTCTTGGTCCTTTTTGCATGTATAGAAGACATGTTCCTGACTGTGATGGCCTATGACAGA TTTGTAGCCATCTGTCGCCCTCTTTACTACCCAGTCATCATAAATCCTCACCTCTGTGTC TTCTTCGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCTGCACAGTTGGATT GTGTGACAATTCACCTTCTCCAAGAATGTGGAAATCTCTAATTTTGTCTGTGAGCCATCT CAACTTCTCTACCTTGCCTGTTCTGACAGCATCATCAATAGCATATTCATATATTTTGAT AGTACTATGTTTGGTTTTCTTCCCATTTCAAGGATCCTTTTGTCTTACTATAAAATTGTC CCCTCCATTCTAAGGATTTCATCGTCAGATGGGAAGTATAAAGCCTTCACCACCTGTGGC TCTCACCTAGCAGTTGTTTGCTTATTTGATGGAACAGGCATTGGCATGTACCTGACTTCA GCTGTGGCACCACCCCCCAGGAATGGTGTGGTGGCGTCAGTGATGTACGCTGTGGTCACC CCCATGCTGAACCCTTTCATCTACAGCCTGAGAAACAGGGACATTCAAAACACCCTGTGG AGGCTGCGCAGCAGAAGAGTGGAATCTCATGATCTGTTCCATCCTTTT |
| Conceptual translation |
VFIFSFSNPLFFPRCPSHTEPQNLTGIXFLLLGLSEDPELQPVLAGLSLSMYLVTVLRN LLSTLAVSSDSPLHTPMYFFLSNLCWADIGFTLAIVPKMTVDMQSHSRVISHAGCLTQMS FLVLFACIEDMFLTVMAYDRFVAICRPLYYPVIINPHLCVFFVLVSFFLSLLDSQLHSWI VXFTFSKNVEISNFVCEPSQLLYLACSDSIINSIFIYFDSTMFGFLPISRILLSYYKIV PSILRISSSDGKYKAFTTCGSHLAVVCLFDGTGIGMYLTSAVAPPPRNGVVASVMYAVVT PMLNPFIYSLRNRDIQNTLWRLRSRRVESHDLFHPF Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 10 | 100 | -100 | SNP | A/C | 1000GP (YRI, YRI) | |
| 10 | 15,008,410 | 15,008,410 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 10 | 15,008,565 | 15,008,565 | SNP | A/C | 1000GP (CEU, CHBJPT) | |
| 10 | 15,008,801 | 15,008,801 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 10 | 15,050,205 | 15,050,205 | SNP | A/C | rs11259428 (DbSNP) | |
| 10 | 15,050,392 | 15,050,392 | SNP | C/T | rs34433238 (DbSNP) | |
| 10 | 15,050,409 | 15,050,409 | SNP | C/T | rs11259429 (DbSNP) | |
| 10 | 15,050,564 | 15,050,564 | SNP | A/C | rs34544074 (DbSNP) | |
| 10 | 15,050,688 | 15,050,688 | SNP | A/G | rs34929991 (DbSNP) | |
| 10 | 15,050,800 | 15,050,800 | SNP | C/T | rs35053386 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 10 | 14,955,178 | 15,060,883 | CopyNumber | Variation_53139 (DGV) |
| 10 | 14,975,171 | 15,070,615 | CopyNumber | Variation_53843 (DGV) |
| 10 | 14,982,997 | 15,064,838 | CopyNumber | Variation_23238 (DGV) |
| 10 | 14,990,369 | 15,060,883 | CopyNumber | Variation_29584 (DGV), Variation_48486 (DGV), Variation_48487 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E115P.aApr07 | exon_3UTR | chr10 | 15,003,415 | 15,005,349 | - | |
| main_exon | 3UTR | chr10 | 15,006,365 | 15,007,872 | - | |
| CDS_partial | chr10 | 15,007,872 | 15,008,354 | - | ||