OR7E116P Olfactory Receptor
| Gene Symbol | OR7E116P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR9-5, HsOR9.2.2P, ORL325 |
| External Ids | HGNC: 15122 GeneBank: AF399421, BK004681, NG_004253 ORDB: ORL325 |
| Build #39 labels | OR7E116P |
| Chromosomal location | 9:90,232,098-90,233,123 (+) |
| Cluster | 9@93 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E108P | 93.57% | 342 |
| OR7E4P | 89.12% | 340 |
| OR7E91P | 88.89% | 342 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 71% | 329 |
| Mouse | Or7e178 | 68% | 308 |
| Rat | Or7e173 | 64% | 308 |
| Cow | OR7E186 | 66% | 327 |
| Orang | OR7E111CP | 86% | 317 |
| Orang | OR7E100P | 86% | 315 |
| Horse | OR7E225 | 69% | 322 |
| Chimp | OR7E111P | 93% | 297 |
Sequence information
| Nucleotide sequence |
CTGGTTTTTATCTTTTATTTTTCCAATCCTCTTTTCTTCCCAAGGTGTCCAAGTCACACA GAGCCACGGCATCTCACAGGTGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCA GAACTGCAGCCTGTCCTCGCTGGGCTGTCCCTGTCCATGTATCTGGTCACAGTGCTAAGG AACCTGCTCATCATCCTGGCTGTGAGCTCTGACTCCCACCTCCACACCCCCATGTACTTC TTCCTCTCCAACCTGTGCTGGGCTGACATCAGTTTCACCTCGGCCACGGTTCCCAAGATG ACGGTGGACATGCAGTCGCATAGCAGAGTCATCTCTTATGCGGGCTGCCTGACACGGATG TCTTTCTTCGTCCTTTTTGCATGTATAGAAGACATGCTCCTGACTGTGATGGCCTAGGAC TGCTTTGTAGCCATCTGTCGCCCTCTGCACTACGCAGTCATCGTGAATCCTCACCTCTGT GTCTTCTTAGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCTGCACAGTTAG ATTGTGTTACAATTCACCTTCTTCAAGAATGTGGAAATCTCTCATTTTGTCTGTGAGCCA TCTCAACTTCTCAACCTTGCCTGTTCTGACAGCTTCATCAATAGCATATTCATGTATTTC GATAGTACTATGTTTGGTTTTCTTCCCATTTCAGGGATCCTTTTGTCTTACTATAAAATT GTCCCCTCCATTCTAAGGATTTCATCGTCAGATGGGAAGTATAAAGCCTTCTCCACCTGT GGCTCTCACCTGGCAGTTGTTTGCTTATTTTATGGAACAGGCATTGGCGTGTACCTGACT TCAGCTGTGGCACCACCCCCCAGCAATGGTGTGGTGGCATCAGTGAAGTACACCGTGGTC ACCCCCATGCTGAACCCTTTCATCTACAGCCTGAGAAACAGGGACATTCAAAGCACCCTG TGGAGGCTGTGCAGCAGAACAGTTAAATCTCTTGATCTGTTCCATTCTTTTTCTTGTGTG GGTAAG |
| Conceptual translation |
LVFIFYFSNPLFFPRCPSHTEPRHLTGVXFLLLGLSEDPELQPVLAGLSLSMYLVTVLR NLLIILAVSSDSHLHTPMYFFLSNLCWADISFTSATVPKMTVDMQSHSRVISYAGCLTRM SFFVLFACIEDMLLTVMAXCFVAICRPLHYAVIVNPHLCVFLVLVSFFLSLLDSQLHSXbr/>IVLQFTFFKNVEISHFVCEPSQLLNLACSDSFINSIFMYFDSTMFGFLPISGILLSYYKI VPSILRISSSDGKYKAFSTCGSHLAVVCLFYGTGIGVYLTSAVAPPPSNGVVASVKYTVV TPMLNPFIYSLRNRDIQSTLWRLCSRTVKSLDLFHSFSCVGK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 9 | 92,994,892 | 92,994,891 | Ins(1) | -/C | rs35867447 (DbSNP) | |
| 9 | 92,995,078 | 92,995,077 | Ins(1) | -/C | rs34120674 (DbSNP) | |
| 9 | 92,995,368 | 92,995,368 | SNP | A/C | rs56125584 (DbSNP) | |
| 9 | 92,994,518 | 92,994,518 | SNP | A/G | rs57510024 (DbSNP) | |
| 9 | 92,994,748 | 92,994,748 | SNP | C/G | rs4083741 (DbSNP) | |
| 9 | 92,994,986 | 92,994,986 | SNP | C/T | rs2777623 (DbSNP) | |
| 9 | 92,995,363 | 92,995,363 | SNP | C/T | rs7861446 (DbSNP) | |
| 9 | 92,994,658 | 92,994,658 | SNP | C/T | rs1888760 (DbSNP) | |
| 9 | 92,995,392 | 92,995,392 | SNP | C/T | rs7852038 (DbSNP) | |
| 9 | 92,995,340 | 92,995,340 | SNP | T/G | rs72492972 (DbSNP) | |
| 9 | 90,232,966 | 90,232,966 | SNP | G/A | 1000GP (CEU) | |
| 9 | 90,233,081 | 90,233,081 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 9 | 90,233,086 | 90,233,086 | SNP | C/A | 1000GP (CEU, CHBJPT) | |
| 9 | 90,233,110 | 90,233,110 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 9 | 100 | -100 | SNP | T/C | 1000GP (YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.