OR7E117P Olfactory Receptor
| Gene Symbol | OR7E117P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-1, HsOR11.2.2P, ORL3574 |
| External Ids | HGNC: 15303 GeneBank: AF399417, BK004788, NG_004384 ORDB: ORL3574 |
| Build #39 labels | OR7E117P |
| Chromosomal location | 11:3,599,644-3,600,669 (-) |
| Cluster | 11@4a |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E129P | 90.06% | 342 |
| OR7E7P | 91.23% | 342 |
| OR7E87P | 91.76% | 340 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 65% | 331 |
| Mouse | Or7e178 | 62% | 310 |
| Rat | Or7e173 | 59% | 310 |
| Cow | OR7E186 | 64% | 329 |
| Orang | OR7E103P | 88% | 307 |
| Orang | OR7E163P | 87% | 299 |
| Orang | OR7E103BP | 86% | 301 |
| Horse | OR7E225 | 65% | 318 |
| Chimp | OR7E161P | 87% | 320 |
| Chimp | OR7E163BP | 86% | 320 |
| Chimp | OR7E115P | 85% | 320 |
Sequence information
| Nucleotide sequence |
CTGGTTTTTATCTTTTATTTTTCCAATCCTCTTTCCTTCTCAAGGTGTCCAAGACACACA GAGCCATGGAATCTCACAGATGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCA GAACTGCAGCCGGTCCTCGCTTTGCTCTCCCTGTCCCTGTCCATGTGTCTGGTCATGGTG CTGAGGAACCTGCTCAGCATCCTGGCTGTCAGCTCTGTCTCTCCCCTCCACACCCCCGTG TACTTCTTCCTCTCTAAACTGTGCTGGGCTGACATCGGTTTCACCTTGGCCACGGTTCCC AAGATGGTTGTGGACATGCAGTCGCATAGCAGAGTCATCTCTCATGCGGGCTGTCTGACG CAGATGTCTTTCTTCATCCTTTTTGCATGTATAGAAGGCATGCTCCTGACAGTGATGGCC TATGACTGCTTTGTAGCCATCTGTCGCCCTCTGCACTACCCAGTCATCGTGAATCCTCAC CTCTGTGTCTCCTTCCTTTTGGTGTCCTTTTTCCTTAGCATGTTGGATTCCCAGCTGCAC AGTTGAATTGTGTTACAATTCACAATCATCAAGAATGTGGAAATCTCTAATTTTGTCTGT GACCCCTCTCAACTTCTCAAACTTGCCTGTTCTGACAGCGTCATCAATAGCATATTCATA TATTTCAATAGTACTATGTTTGGTTTTCTTCCCATTTCAGGGATCCTATGGTCTTACTGT AAAATCGTCCCCTCCATTCTAAGGATTTCATCATCAGATGGGAAGTATAAAGCCTTCTCC ACATGTGGCTCTCACCTAGCAGTTGTTTGCTGATTTTATAGAACAGGCATTGGCATGTAC CTGACTTCAGCTGTGTCACCACCCCCCAGGAATGGTGTGGTGGCGTCAGCGATGTTCTCT GTGGTCACCCCCATGCTGAACCTTTTCATCTACAGCCTGAGAAACAGGGACATACAAAGT GCCCTGCGGAGGCTGCTCAGCAGAACAGTCGAATCTTATGATCTGTTCCATCCTTTTTCT TGTGTG |
| Conceptual translation |
LVFIFYFSNPLSFSRCPRHTEPWNLTDVXFLLLGLSEDPELQPVLALLSLSLSMCLVMV LRNLLSILAVSSVSPLHTPVYFFLSKLCWADIGFTLATVPKMVVDMQSHSRVISHAGCLT QMSFFILFACIEGMLLTVMAYDCFVAICRPLHYPVIVNPHLCVSFLLVSFFLSMLDSQLH SXVLQFTIIKNVEISNFVCDPSQLLKLACSDSVINSIFIYFNSTMFGFLPISGILWSYC KIVPSILRISSSDGKYKAFSTCGSHLAVVCXYRTGIGMYLTSAVSPPPRNGVVASAMFS VVTPMLNLFIYSLRNRDIQSALRRLLSRTVESYDLFHPFSCV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | G/A | 1000GP (YRI) | |
| 11 | 3,621,010 | 3,621,010 | SNP | A/G | rs34735464 (DbSNP) | |
| 11 | 3,621,015 | 3,621,015 | SNP | C/T | rs9735092 (DbSNP) | |
| 11 | 3,621,060 | 3,621,060 | SNP | T/G | rs4910801 (DbSNP) | |
| 11 | 3,621,301 | 3,621,301 | SNP | C/T | rs9735302 (DbSNP) | |
| 11 | 3,621,439 | 3,621,438 | Ins(1) | -/G | rs35781336 (DbSNP) | |
| 11 | 3,621,541 | 3,621,541 | SNP | A/G | rs9737075 (DbSNP) | |
| 11 | 3,621,583 | 3,621,583 | Del(1) | -/A | rs34977624 (DbSNP) | |
| 11 | 3,621,593 | 3,621,593 | SNP | T/C | rs1812223 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 235 (Hasin) | |||
| 11 | 3,236,512 | 3,801,429 | CopyNumber | Variation_3833 (DGV) |
| 11 | 3,405,664 | 3,622,881 | CopyNumber | Variation_85617 (DGV) |
| 11 | 3,426,081 | 3,674,989 | CopyNumber | Variation_71243 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.