OR7E11P Olfactory Receptor
| Gene Symbol | OR7E11P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-2, HsOR11.14.2P, ORL3581 |
| External Ids | HGNC: 8382 GeneBank: AF065853, NG_002181 ORDB: ORL3581 |
| Build #39 labels | OR7E144P, OR7E11P |
| Chromosomal location | 11:67,735,597-67,736,547 (-) |
| Cluster | 11@67 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E12P | 91.8% | 317 |
| OR7E59P | 92.5% | 320 |
| OR7E84P | 89.69% | 320 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 68% | 317 |
| Mouse | Or7e178 | 64% | 314 |
| Rat | Or7e173 | 64% | 310 |
| Cow | OR7E186 | 68% | 311 |
| Orang | OR7E12P | 87% | 314 |
| Orang | OR7E53P | 86% | 314 |
| Orang | OR7E14P | 85% | 317 |
| Orang | OR7E84BP | 84% | 317 |
| Horse | OR7E220 | 67% | 313 |
| Chimp | OR7E53P | 87% | 320 |
| Chimp | OR7E59P | 87% | 317 |
| Chimp | OR7E36P | 87% | 315 |
| Chimp | OR7E33P | 85% | 315 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | EC516607 |
Sequence information
| Nucleotide sequence |
AACTATACAGATCCACATAGTCTAACAGATGTCTCTATATTCCTCCTCCTCAAACTCTCA GAGGATCCAGAACTGCAGCCGGTCGTCGCTGGGCTGTTCCTGTCCATGTGCCTGGTCACA GTGCTGGGGAACCTGCTCATCATCCTGGCCGTCAGCCCTGACTCCCACCTCCACACCCCC ATGTACTTCATCCTTTCCAACCTGCCCTTGCCTGACATCGGTTTCACCTCCACCACGGTC CCCAAGATGATTGTGGACATCCAGTCTCACAGCAGAGTCATCTCCTATGCAGGCTGCCTG ACTCAGATGTCTCTCTTTGCCATTTTTGGAGGCATGGAAGAGAGACATGCTCCTGAGTGT GATGGCCTATGGCCGGTTTGTAGCCATCTGTCACCCTCTATATCGTTCAGCAATCTTGAA CCCATGTTTCTGTGGCTTCCTAGATTTGTTGTCTTCGTTTTGTTTTGTTTTGTTTTTCTC AGTCTTTTAGACTCCCAGCTGCACAACTTGATTGCCTTACAAATGACCGGCTTCAAGGAT GTGGAATTCCTAATTTCTTCTGGGAACCTTCTCAACTCCCCCATCTTGCATGTTGTGACA CCTTCACCAGGAACATCAACCTGTATTTCCCTGCTGCCGTATTTGGTTTTCTTCCCATCT TGGGGACCTTTTCTCTTACTGTAAAATTGTTTCCTCCATTCTGAGGGTTTCATCATCAGG TGGGAAGTATAAACCTTCTCCACCTGTGGGTCTCACCTGCCAGTTGTTTGCTGATTTTGT GGAACAGGTGTTGGAGGGTACCTCGGTTCAGATGTGTCATCTTCCCCAAGAAAGAGTGCA GTGGCCTCAGTGATGTACACGGTGGTCACCCCCATGCTGAACCCCTTCATGTACAGCCTG AGAAACAGGGATATTAAAAGTGTCCTGCGGCGGCCGCACGGCAGCACAGTC |
| Conceptual translation |
NYTDPHSLTDVSIFLLLKLSEDPELQPVVAGLFLSMCLVTVLGNLLIILAVSPDSHLHTP MYFILSNLPLPDIGFTSTTVPKMIVDIQSHSRVISYAGCLTQMSLFAIFGGMEE\MLLS VMAYGRFVAICHPLYRSAILNPCFCGFL\CCLRFVLF\FLSLLDSQLHNLIALQMTGF KDV/IPNFFWEPSQLPHLACCDTFTRNINLYFPAAVFGFLPILG/LFSYCKIVSSILR VSSSGGKYK/FSTCGSHLPVVCXCGTGVGGYLGSDVSSSPRKSAVASVMYTVVTPMLN PFMYSLRNRDIKSVLRRPHGSTV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 67,503,876 | 67,503,875 | Ins(1) | -/T | rs34845122 (DbSNP) | |
| 11 | 67,503,215 | 67,503,215 | SNP | A/G | rs7110091 (DbSNP) | |
| 11 | 67,503,148 | 67,503,148 | SNP | A/G | rs7109966 (DbSNP) | |
| 11 | 67,503,115 | 67,503,115 | SNP | A/T | rs12222137 (DbSNP) | |
| 11 | 67,503,110 | 67,503,110 | SNP | C/T | rs7109660 (DbSNP) | |
| 11 | 67,503,607 | 67,503,607 | SNP | G/T | rs7126386 (DbSNP) | |
| 11 | 67,735,744 | 67,735,744 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 67,736,159 | 67,736,159 | SNP | A/C | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 67,472,905 | 67,891,289 | CopyNumber | Variation_2931 (DGV) |
| 11 | 67,234,322 | 67,626,901 | CopyNumber | Variation_5275 (DGV) |
| 11 | 67,501,626 | 67,748,817 | CopyNumber | Variation_10366 (DGV), Variation_48875 (DGV) |
| 11 | 67,501,626 | 67,673,682 | CopyNumber | Variation_10367 (DGV) |
| 11 | 67,501,626 | 67,715,028 | CopyNumber | Variation_48874 (DGV) |
| 11 | 67,448,219 | 67,765,961 | CopyNumber | Variation_85827 (DGV) |
| 11 | 67,501,068 | 67,504,118 | Deletion | #304 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E11P.aApr07-unspliced | main_exon | CDS_partial | chr11 | 67,735,787 | 67,736,547 | - |
| 5UTR | chr11 | 67,736,547 | 67,736,565 | - | ||