OR7E125P Olfactory Receptor
| Gene Symbol | OR7E125P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | PJCG6, ORL3215 |
| External Ids | HGNC: 15098 GeneBank: AF359416, AF399407, NG_004256, NG_004634, XM_496950 ORDB: ORL3215 |
| Build #39 labels | OR7E125P |
| Chromosomal location | 8:7,246,619-7,247,587 (-) |
| Cluster | 8@7a |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E154P | 100% | 323 |
| OR7E157P | 96.59% | 323 |
| OR7E96P | 96.59% | 323 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E153 | 69% | 306 |
| Mouse | Or7e178 | 64% | 302 |
| Rat | Or7e173 | 61% | 305 |
| Cow | OR7E186 | 68% | 306 |
| Orang | OR7E103P | 89% | 307 |
| Orang | OR7E163P | 88% | 299 |
| Orang | OR7E163RP | 88% | 299 |
| Orang | OR7E103BP | 87% | 301 |
| Horse | OR7E225 | 69% | 305 |
| Chimp | OR7E7P | 89% | 307 |
| Chimp | OR7E163TP | 91% | 299 |
| Chimp | OR7E161P | 88% | 309 |
| Chimp | OR7E115P | 86% | 309 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | DB305141 |
| mRNA | AF359416 |
Sequence information
| Nucleotide sequence |
ATGTTGGGACTAATATCTCACAGGTGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGA TCCAGAACTGCAGCCGGCCCTCGCTTTGCTGTCCCTGTCCCTGTCCATGTATCTGGTCAC GGTGCTGAGGAACCTGTTCAGCATCCTGGCTGTCAGCTCTGACTGCCCCCTCCACACCCC CATGTACTTCTTCCTCTCCAACCTGTGCTGGCCTGACATCGGTTTCACCTCGGCCATGGT TCCCAAGATGATTGTGGACACGCAGTCGCATAGCAGAGTCATCTCTCATGCGGGCTGCCT GACACAGATGTCTTTCCTGCTCCTTGTTGCATGTATAGAAGGCATGCTCCTGACTGTGAT GGCCTATGACTGCTTTGTAGCCATCTGTCGCCCTCTGCACTACCCAGTCATCGTGAATCC TCACCTCTGTGTCTTCTTCGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCT GCACAGTTGGATTGTGTTACAATTAACCATCATCAAGAATGTGGAAATCTCTAATTTGGT CTGTGACCCCTCTCAACTTCTCAAACTTGCCTGTTCTGACAGTGTCATCAATAACATATT CATATATTTCGATAGTACTATGTTTGGTTTTCTTCCCATTTCAGGGATCTTTTTGTCTTA CTATAAAATTGTCCCCTCCATTCTAAGGATTTCATCGTCAGATGGGAAGTATAAAGCCTT CTCCACCTGTGGCTGTCATCTAGCAGTTGTTTGCTGGTTTTATGGAACAGGCATTGGCAT GTACCTGACTTCAGCTGTGTCACCACCCCCCAGGAATGGTGTGGTGGCATCAGTGATGTA CGCTGTGGTCACCCCATGCTGAACCTTTTCATCTGCAGCCTGAGAAACAGGGACATACAA AGTGCCCTGCGGAGGCTGGGCAGCAGAGCATTCGAATCTCATGATCTGTTCCATCCTTTT TCTTGTGTG |
| Conceptual translation |
MLGL\LTGVXFLLLGLSEDPELQPALALLSLSLSMYLVTVLRNLFSILAVSSDCPLHT PMYFFLSNLCWPDIGFTSAMVPKMIVDTQSHSRVISHAGCLTQMSFLLLVACIEGMLLTV MAYDCFVAICRPLHYPVIVNPHLCVFFVLVSFFLSLLDSQLHSWIVLQLTIIKNVEISNL VCDPSQLLKLACSDSVINNIFIYFDSTMFGFLPISGIFLSYYKIVPSILRISSSDGKYKA FSTCGCHLAVVCWFYGTGIGMYLTSAVSPPPRNGVVASVMYAVV/PMLNLFICSLRNRD IQSALRRLGSRAFESHDLFHPFSCV Protein domains and features |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 8 | 6,884,206 | 8,174,628 | CopyNumber | Variation_0296 (DGV) |
| 8 | 6,925,972 | 8,065,971 | InversionBreakpoint | Variation_0348 (DGV) |
| 8 | 6,949,150 | 7,106,348 | CopyNumber | Variation_2114 (DGV) |
| 8 | 6,921,404 | 8,145,931 | CopyNumber | Variation_2732 (DGV) |
| 8 | 6,731,720 | 8,306,743 | CopyNumber | Variation_3719 (DGV) |
| 8 | 7,054,054 | 7,251,166 | CopyNumber | Variation_4578 (DGV) |
| 8 | 7,053,215 | 7,753,552 | CopyNumber | Variation_7702 (DGV) |
| 8 | 7,104,792 | 7,892,745 | CopyNumber | Variation_31424 (DGV) |
| 8 | 7,102,793 | 7,161,031 | CopyNumber | Variation_36861 (DGV) |
| 8 | 7,007,415 | 7,368,995 | CopyNumber | Variation_52607 (DGV) |
| 8 | 7,060,331 | 7,212,430 | CopyNumber | Variation_70255 (DGV) |
| 8 | 7,066,055 | 7,474,581 | CopyNumber | Variation_70256 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| PJCG6andOR7E125P.aApr07 | main_exon | 3UTR | chr8 | 7,246,581 | 7,246,619 | - |
| CDS_partial | chr8 | 7,246,619 | 7,247,531 | - | ||