OR7E128P Olfactory Receptor
| Gene Symbol | OR7E128P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.15.3P, ORL3644 |
| External Ids | HGNC: 15305 GeneBank: AB065704, AB065749, NG_004186 ORDB: ORL3644 |
| Build #39 labels | OR7E128P |
| Chromosomal location | 11:71,893,407-71,894,438 (+) |
| Cluster | 11@72 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E129P | 91.81% | 342 |
| OR7E1P | 90.06% | 342 |
| OR7E86P | 90.32% | 341 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 66% | 331 |
| Mouse | Or7e178 | 63% | 310 |
| Rat | Or7e173 | 58% | 310 |
| Cow | OR7E186 | 64% | 329 |
| Orang | OR7E103P | 88% | 307 |
| Orang | OR7E163P | 87% | 299 |
| Orang | OR7E111P | 85% | 299 |
| Horse | OR7E225 | 68% | 318 |
| Chimp | OR7E163MP | 88% | 320 |
| Chimp | OR7E163BP | 87% | 320 |
| Chimp | OR7E161P | 87% | 320 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | H49406 |
Sequence information
| Nucleotide sequence |
CTGGTTTTTATCTTTTATTTTTCCAATCCTCTTTCCTTCTCAAGGTGTCCAAGACACACA GAGCCACGGAATCTCACAAGTGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCA GAACTGCAGCCGCTCCTCGCTTTGCTGTCCCTGTCCCTGTCCATGCATCTGGTCATGGTG CTGAGGAACCTGCTCAACATCCTGGCTGTCAGCTCTGACTCCCCCCTCCACACCCCCACG TACTTCTTCCTCTCCAACCTGTGCTGGGCTGACACCGGTTTCACCTCGGCCACGGTTCCC AATATGATTGTGGACATGCAGTCGCATAGCAGAGTCATCTCTCATGCGGACTGCCTGACA CAGATTTCCTTCTTGCTCCTTTTTGCATGTATAGAAGGCATGCTCCTGACTGTGATGACC TATGACTGCTTTGTAGCCATCTGTTGCCCTCTGCACTACCCAGTCATCGTGAATCCTCAC CTCTGTGTCTTCTTCGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCTGCAC AGTTGGATTGTGTTACAATTCACCATCATCAAGAATGTGGAAATCTCTAATTCTGTCTGT GACCCCTCTCAACTTCTCAAACTTGCTTGTTCTGACAGCGTCATCAATAGCATATTCATG CATTTCCATAATACTATGTTTGGTTTTCTTCCCATTTCAGGGATCCTTGTGTCTTACTAT AAAATCGTCCCCTCCATTCTTAGGATTTCATCGTCAGATGGGAAGTATAAAGCCTTCTCC ACCTGTGGCTCTCACCTAGCAGTTGTTTGCTGATTTTATGGAACAGGCATTGGCGTGTAC TTGACTTCAGCTCTGTCACCACCCCCCAGGAATGGTGTGATGGCGTCAGTGATGTACGCT GTGGTCACCCCCATGCTGAACCTTTTCATCTACAGCCTGAGAAACAGGGACATACAAAGT GCCCTGTGGAGGCTGCTCAGCAGAACAGTCGAATCTCATGATCTGTTCCATCCTTTTTCT TGTGTGGGTAAG |
| Conceptual translation |
LVFIFYFSNPLSFSRCPRHTEPRNLTSVXFLLLGLSEDPELQPLLALLSLSLSMHLVMV LRNLLNILAVSSDSPLHTPTYFFLSNLCWADTGFTSATVPNMIVDMQSHSRVISHADCLT QISFLLLFACIEGMLLTVMTYDCFVAICCPLHYPVIVNPHLCVFFVLVSFFLSLLDSQLH SWIVLQFTIIKNVEISNSVCDPSQLLKLACSDSVINSIFMHFHNTMFGFLPISGILVSYY KIVPSILRISSSDGKYKAFSTCGSHLAVVCXYGTGIGVYLTSALSPPPRNGVMASVMYA VVTPMLNLFIYSLRNRDIQSALWRLLSRTVESHDLFHPFSCVGK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 71,604,591 | 71,604,591 | SNP | A/G | rs11235398 (DbSNP) | |
| 11 | 71,605,332 | 71,605,332 | SNP | A/G | rs475959 (DbSNP) | |
| 11 | 71,604,754 | 71,604,754 | SNP | A/G | rs12295215 (DbSNP) | |
| 11 | 71,604,784 | 71,604,784 | SNP | C/G | rs12274833 (DbSNP) | |
| 11 | 71,604,727 | 71,604,727 | SNP | C/T | rs526054 (DbSNP) | |
| 11 | 71,604,564 | 71,604,564 | SNP | G/T | rs12803431 (DbSNP) | |
| 11 | 71,894,025 | 71,894,025 | SNP | A/C | 1000GP (CEU, CHBJPT) | |
| 11 | 71,894,077 | 71,894,077 | SNP | A/G | 1000GP (CEU) | |
| 11 | 71,894,286 | 71,894,286 | SNP | A/G | 1000GP (CEU) | |
| 11 | 100 | -100 | SNP | G/C | 1000GP (YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 71,363,639 | 71,657,576 | CopyNumber | Variation_3857 (DGV) |
| 11 | 71,292,416 | 71,613,954 | CopyNumber | Variation_85847 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E128P.aApr07-unspliced | main_exon | 5UTR | chr11 | 71,893,352 | 71,893,407 | + |
| CDS_partial | chr11 | 71,893,407 | 71,893,784 | + | ||